STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Myrod_0827Unannotated protein. (471 aa)    
Predicted Functional Partners:
Myrod_3473
Unannotated protein.
   
 
 0.646
Myrod_1128
Unannotated protein; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence.
   
    0.585
Myrod_0826
Unannotated protein.
  
    0.557
Myrod_2577
Unannotated protein; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
   
    0.544
Myrod_2832
Unannotated protein; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
   
    0.544
Myrod_0770
Unannotated protein; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
   
    0.544
GCA_001549985_00666
Unannotated protein.
  
     0.510
Your Current Organism:
Myroides odoratus
NCBI taxonomy Id: 256
Other names: ATCC 4651, CCUG 7321, CIP 103105, DSM 2801, Flavobacterium odoratum, IAM 14199, IFO 14945, JCM 7458, M. odoratus, NBRC 14945, NCTC 11036
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.