Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Myrod_1232 | Myrod_1233 | GCA_001549985_03187 | GCA_001549985_03186 | Unannotated protein. | Unannotated protein. | 0.999 |
Myrod_1232 | Myrod_1234 | GCA_001549985_03187 | GCA_001549985_03185 | Unannotated protein. | Unannotated protein. | 0.999 |
Myrod_1232 | Myrod_1235 | GCA_001549985_03187 | GCA_001549985_03184 | Unannotated protein. | Unannotated protein. | 0.999 |
Myrod_1232 | Myrod_1236 | GCA_001549985_03187 | GCA_001549985_03183 | Unannotated protein. | Unannotated protein. | 0.999 |
Myrod_1232 | Myrod_1237 | GCA_001549985_03187 | GCA_001549985_03182 | Unannotated protein. | Unannotated protein. | 0.996 |
Myrod_1232 | Myrod_1238 | GCA_001549985_03187 | GCA_001549985_03181 | Unannotated protein. | Unannotated protein. | 0.999 |
Myrod_1232 | Myrod_1902 | GCA_001549985_03187 | GCA_001549985_02084 | Unannotated protein. | Unannotated protein. | 0.912 |
Myrod_1232 | nuoB | GCA_001549985_03187 | GCA_001549985_02094 | Unannotated protein. | Unannotated protein; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. | 0.645 |
Myrod_1232 | nuoC | GCA_001549985_03187 | GCA_001549985_02093 | Unannotated protein. | Unannotated protein; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 30 kDa subunit family. | 0.645 |
Myrod_1232 | nuoD | GCA_001549985_03187 | GCA_001549985_02092 | Unannotated protein. | Unannotated protein; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 49 kDa subunit family. | 0.645 |
Myrod_1233 | Myrod_1232 | GCA_001549985_03186 | GCA_001549985_03187 | Unannotated protein. | Unannotated protein. | 0.999 |
Myrod_1233 | Myrod_1234 | GCA_001549985_03186 | GCA_001549985_03185 | Unannotated protein. | Unannotated protein. | 0.999 |
Myrod_1233 | Myrod_1235 | GCA_001549985_03186 | GCA_001549985_03184 | Unannotated protein. | Unannotated protein. | 0.999 |
Myrod_1233 | Myrod_1236 | GCA_001549985_03186 | GCA_001549985_03183 | Unannotated protein. | Unannotated protein. | 0.999 |
Myrod_1233 | Myrod_1237 | GCA_001549985_03186 | GCA_001549985_03182 | Unannotated protein. | Unannotated protein. | 0.994 |
Myrod_1233 | Myrod_1238 | GCA_001549985_03186 | GCA_001549985_03181 | Unannotated protein. | Unannotated protein. | 0.999 |
Myrod_1233 | Myrod_1902 | GCA_001549985_03186 | GCA_001549985_02084 | Unannotated protein. | Unannotated protein. | 0.904 |
Myrod_1233 | nuoB | GCA_001549985_03186 | GCA_001549985_02094 | Unannotated protein. | Unannotated protein; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. | 0.645 |
Myrod_1233 | nuoC | GCA_001549985_03186 | GCA_001549985_02093 | Unannotated protein. | Unannotated protein; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 30 kDa subunit family. | 0.645 |
Myrod_1233 | nuoD | GCA_001549985_03186 | GCA_001549985_02092 | Unannotated protein. | Unannotated protein; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 49 kDa subunit family. | 0.645 |
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