STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Myrod_1651Unannotated protein. (353 aa)    
Predicted Functional Partners:
Myrod_1656
Unannotated protein; Belongs to the argininosuccinate synthase family. Type 1 subfamily.
 
 0.995
Myrod_1654
Unannotated protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
 
 
 0.993
Myrod_1653
Unannotated protein; Belongs to the aspartate/ornithine carbamoyltransferase superfamily.
 
 
 0.977
argC
Unannotated protein; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 1 subfamily.
 
 0.976
argB
Unannotated protein; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily.
 
 
 0.973
argH
Unannotated protein.
 
  
 0.966
Myrod_1657
Unannotated protein.
 
 
 0.953
Myrod_3242
Unannotated protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
 
 0.901
Myrod_2389
Unannotated protein; Belongs to the arginase family.
     
 0.894
Myrod_1440
Unannotated protein; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.
  
 
 0.867
Your Current Organism:
Myroides odoratus
NCBI taxonomy Id: 256
Other names: ATCC 4651, CCUG 7321, CIP 103105, DSM 2801, Flavobacterium odoratum, IAM 14199, IFO 14945, JCM 7458, M. odoratus, NBRC 14945, NCTC 11036
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