STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Myrod_1606Unannotated protein. (103 aa)    
Predicted Functional Partners:
rsmA
Unannotated protein; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits.
       0.811
Myrod_1608
Unannotated protein; Acts as a magnesium transporter.
       0.785
Myrod_1609
Unannotated protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
       0.783
Myrod_1605
Unannotated protein.
       0.596
Myrod_2841
Unannotated protein.
  
     0.570
recO
Unannotated protein; Involved in DNA repair and RecF pathway recombination.
  
     0.547
Myrod_0557
Unannotated protein.
  
     0.541
Myrod_0817
Unannotated protein.
  
     0.527
Myrod_2479
Unannotated protein.
  
     0.497
Myrod_2303
Unannotated protein.
  
     0.457
Your Current Organism:
Myroides odoratus
NCBI taxonomy Id: 256
Other names: ATCC 4651, CCUG 7321, CIP 103105, DSM 2801, Flavobacterium odoratum, IAM 14199, IFO 14945, JCM 7458, M. odoratus, NBRC 14945, NCTC 11036
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