Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Myrod_0557 | Myrod_1606 | GCA_001549985_01104 | GCA_001549985_03657 | Unannotated protein. | Unannotated protein. | 0.541 |
Myrod_0557 | Myrod_2479 | GCA_001549985_01104 | GCA_001549985_00071 | Unannotated protein. | Unannotated protein. | 0.409 |
Myrod_0557 | Myrod_2841 | GCA_001549985_01104 | GCA_001549985_01776 | Unannotated protein. | Unannotated protein. | 0.421 |
Myrod_0557 | recO | GCA_001549985_01104 | GCA_001549985_00809 | Unannotated protein. | Unannotated protein; Involved in DNA repair and RecF pathway recombination. | 0.575 |
Myrod_0817 | Myrod_1606 | GCA_001549985_02802 | GCA_001549985_03657 | Unannotated protein. | Unannotated protein. | 0.527 |
Myrod_1605 | Myrod_1606 | GCA_001549985_03658 | GCA_001549985_03657 | Unannotated protein. | Unannotated protein. | 0.596 |
Myrod_1605 | Myrod_1608 | GCA_001549985_03658 | GCA_001549985_03655 | Unannotated protein. | Unannotated protein; Acts as a magnesium transporter. | 0.544 |
Myrod_1605 | Myrod_1609 | GCA_001549985_03658 | GCA_001549985_03654 | Unannotated protein. | Unannotated protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 0.639 |
Myrod_1605 | rsmA | GCA_001549985_03658 | GCA_001549985_03656 | Unannotated protein. | Unannotated protein; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits. | 0.857 |
Myrod_1606 | Myrod_0557 | GCA_001549985_03657 | GCA_001549985_01104 | Unannotated protein. | Unannotated protein. | 0.541 |
Myrod_1606 | Myrod_0817 | GCA_001549985_03657 | GCA_001549985_02802 | Unannotated protein. | Unannotated protein. | 0.527 |
Myrod_1606 | Myrod_1605 | GCA_001549985_03657 | GCA_001549985_03658 | Unannotated protein. | Unannotated protein. | 0.596 |
Myrod_1606 | Myrod_1608 | GCA_001549985_03657 | GCA_001549985_03655 | Unannotated protein. | Unannotated protein; Acts as a magnesium transporter. | 0.785 |
Myrod_1606 | Myrod_1609 | GCA_001549985_03657 | GCA_001549985_03654 | Unannotated protein. | Unannotated protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 0.783 |
Myrod_1606 | Myrod_2303 | GCA_001549985_03657 | GCA_001549985_00255 | Unannotated protein. | Unannotated protein. | 0.457 |
Myrod_1606 | Myrod_2479 | GCA_001549985_03657 | GCA_001549985_00071 | Unannotated protein. | Unannotated protein. | 0.497 |
Myrod_1606 | Myrod_2841 | GCA_001549985_03657 | GCA_001549985_01776 | Unannotated protein. | Unannotated protein. | 0.570 |
Myrod_1606 | recO | GCA_001549985_03657 | GCA_001549985_00809 | Unannotated protein. | Unannotated protein; Involved in DNA repair and RecF pathway recombination. | 0.547 |
Myrod_1606 | rsmA | GCA_001549985_03657 | GCA_001549985_03656 | Unannotated protein. | Unannotated protein; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits. | 0.811 |
Myrod_1608 | Myrod_1605 | GCA_001549985_03655 | GCA_001549985_03658 | Unannotated protein; Acts as a magnesium transporter. | Unannotated protein. | 0.544 |
page 1 of 3