STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JCM33374_g4544BZIP domain-containing protein. (452 aa)    
Predicted Functional Partners:
JCM33374_g1853
Importin N-terminal domain-containing protein.
    
 
 0.906
JCM33374_g3930
S5A_REDUCTASE domain-containing protein.
   
 0.896
JCM33374_g4024
Very-long-chain 3-oxoacyl-CoA reductase; Component of the microsomal membrane bound fatty acid elongation system, which produces the 26-carbon very long-chain fatty acids (VLCFA) from palmitate. Catalyzes the reduction of the 3- ketoacyl-CoA intermediate that is formed in each cycle of fatty acid elongation. VLCFAs serve as precursors for ceramide and sphingolipids.
   
 0.806
JCM33374_g3888
Uncharacterized protein.
     
 0.784
JCM33374_g5301
Acyl-CoA desaturase; Stearyl-CoA desaturase that utilizes O(2) and electrons from reduced cytochrome b5 to introduce the first double bond into saturated fatty acyl-CoA substrates.
     
 0.784
JCM33374_g1200
Response regulatory domain-containing protein.
   
 
 0.772
JCM33374_g730
BZIP domain-containing protein.
    
 
 0.720
JCM33374_g4181
Bromo domain-containing protein.
    
   0.580
JCM33374_g5463
Uncharacterized protein.
    
 
 0.570
JCM33374_g3751
Thioredoxin domain-containing protein.
    
 
 0.568
Your Current Organism:
Metschnikowia sp. JCM33374
NCBI taxonomy Id: 2562755
Other names: M. sp. JCM 33374, Metschnikowia sp. JCM 33374
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