STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DIP0127Similar to Streptomyces coelicolor putative regulatory protein SCE50.15 TR:Q9L048 (EMBL:AL163672) (168 aa) fasta scores: E(): 3.3e-18, 41.89% id in 148 aa. (156 aa)    
Predicted Functional Partners:
DIP0126
Similar to Streptomyces coelicolor conserved hypothetical protein SCBAC36F5.07 TR:CAC42843 (EMBL:AL592292) (562 aa) fasta scores: E(): 3.6e-40, 35.62% id in 553 aa.
       0.785
DIP0125
Conserved hypothetical protein; Similar to the C-terminal region of Pseudomonas aeruginosa hypothetical protein PA4923 SW:YDC3_PSEAE (P48636) (195 aa) fasta scores: E(): 3.3e-27, 44.97% id in 189 aa.
       0.763
DIP0124
Putative membrane protein; Similar to Streptomyces coelicolor putative integral membrane protein SCBAC19F3.14 TR:CAC44337 (EMBL:AL596102) (517 aa) fasta scores: E(): 3.6e-47, 37.96% id in 453 aa.
 
     0.552
Your Current Organism:
Corynebacterium diphtheriae
NCBI taxonomy Id: 257309
Other names: C. diphtheriae NCTC 13129, Corynebacterium diphtheriae NCTC 13129, Corynebacterium diphtheriae NCTC13129
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