| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| DIP0135 | DIP0149 | DIP0135 | DIP0149 | Similar to Mycobacterium tuberculosis putative oxidoreductase Rv0484c or MT0502 or MTCY20G9.10c SW:Y484_MYCTU (Q11150) (251 aa) fasta scores: E(): 1.2e-45, 57.32% id in 232 aa; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | Conserved hypothetical protein (pseudogene); Pseudogene. Similar to the plasmid borne Corynebacterium striatum YtpG TR:Q9FB50 (EMBL:AF024666) (76 aa) fasta scores: E(): 3.2e-09, 78.46% id in 65 aa. Presents a frameshift at residue 50. | 0.421 |
| DIP0149 | DIP0135 | DIP0149 | DIP0135 | Conserved hypothetical protein (pseudogene); Pseudogene. Similar to the plasmid borne Corynebacterium striatum YtpG TR:Q9FB50 (EMBL:AF024666) (76 aa) fasta scores: E(): 3.2e-09, 78.46% id in 65 aa. Presents a frameshift at residue 50. | Similar to Mycobacterium tuberculosis putative oxidoreductase Rv0484c or MT0502 or MTCY20G9.10c SW:Y484_MYCTU (Q11150) (251 aa) fasta scores: E(): 1.2e-45, 57.32% id in 232 aa; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.421 |
| DIP0149 | DIP0150 | DIP0149 | DIP0150 | Conserved hypothetical protein (pseudogene); Pseudogene. Similar to the plasmid borne Corynebacterium striatum YtpG TR:Q9FB50 (EMBL:AF024666) (76 aa) fasta scores: E(): 3.2e-09, 78.46% id in 65 aa. Presents a frameshift at residue 50. | Conserved hypothetical protein; Similar to Mycobacterium tuberculosis CDC1551 conserved hypothetical protein MT0934.1 TR:AAK45182 (EMBL:AE006980) (257 aa) fasta scores: E(): 3.3e-32, 41.96% id in 255 aa. | 0.836 |
| DIP0149 | DIP0151 | DIP0149 | DIP0151 | Conserved hypothetical protein (pseudogene); Pseudogene. Similar to the plasmid borne Corynebacterium striatum YtpG TR:Q9FB50 (EMBL:AF024666) (76 aa) fasta scores: E(): 3.2e-09, 78.46% id in 65 aa. Presents a frameshift at residue 50. | Similar to Streptomyces coelicolor conserved hypothetical protein SC10F4.36c TR:Q9F3M5 (EMBL:AL450350) (94 aa) fasta scores: E(): 8.6e-07, 38.2% id in 89 aa, and to Mycobacterium tuberculosis hypothetical 11.0 kDa protein Rv3204 or MTCY07D11.22c TR:O05862 (EMBL:Z95120) (101 aa) fasta scores: E(): 0.00013, 40% id in 95 aa. | 0.873 |
| DIP0149 | dnaN | DIP0149 | DIP0002 | Conserved hypothetical protein (pseudogene); Pseudogene. Similar to the plasmid borne Corynebacterium striatum YtpG TR:Q9FB50 (EMBL:AF024666) (76 aa) fasta scores: E(): 3.2e-09, 78.46% id in 65 aa. Presents a frameshift at residue 50. | DNA polymerase III, beta chain; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of r [...] | 0.437 |
| DIP0149 | recF | DIP0149 | DIP0003 | Conserved hypothetical protein (pseudogene); Pseudogene. Similar to the plasmid borne Corynebacterium striatum YtpG TR:Q9FB50 (EMBL:AF024666) (76 aa) fasta scores: E(): 3.2e-09, 78.46% id in 65 aa. Presents a frameshift at residue 50. | DNA replication and repair protein; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP. | 0.768 |
| DIP0150 | DIP0149 | DIP0150 | DIP0149 | Conserved hypothetical protein; Similar to Mycobacterium tuberculosis CDC1551 conserved hypothetical protein MT0934.1 TR:AAK45182 (EMBL:AE006980) (257 aa) fasta scores: E(): 3.3e-32, 41.96% id in 255 aa. | Conserved hypothetical protein (pseudogene); Pseudogene. Similar to the plasmid borne Corynebacterium striatum YtpG TR:Q9FB50 (EMBL:AF024666) (76 aa) fasta scores: E(): 3.2e-09, 78.46% id in 65 aa. Presents a frameshift at residue 50. | 0.836 |
| DIP0150 | DIP0151 | DIP0150 | DIP0151 | Conserved hypothetical protein; Similar to Mycobacterium tuberculosis CDC1551 conserved hypothetical protein MT0934.1 TR:AAK45182 (EMBL:AE006980) (257 aa) fasta scores: E(): 3.3e-32, 41.96% id in 255 aa. | Similar to Streptomyces coelicolor conserved hypothetical protein SC10F4.36c TR:Q9F3M5 (EMBL:AL450350) (94 aa) fasta scores: E(): 8.6e-07, 38.2% id in 89 aa, and to Mycobacterium tuberculosis hypothetical 11.0 kDa protein Rv3204 or MTCY07D11.22c TR:O05862 (EMBL:Z95120) (101 aa) fasta scores: E(): 0.00013, 40% id in 95 aa. | 0.836 |
| DIP0151 | DIP0149 | DIP0151 | DIP0149 | Similar to Streptomyces coelicolor conserved hypothetical protein SC10F4.36c TR:Q9F3M5 (EMBL:AL450350) (94 aa) fasta scores: E(): 8.6e-07, 38.2% id in 89 aa, and to Mycobacterium tuberculosis hypothetical 11.0 kDa protein Rv3204 or MTCY07D11.22c TR:O05862 (EMBL:Z95120) (101 aa) fasta scores: E(): 0.00013, 40% id in 95 aa. | Conserved hypothetical protein (pseudogene); Pseudogene. Similar to the plasmid borne Corynebacterium striatum YtpG TR:Q9FB50 (EMBL:AF024666) (76 aa) fasta scores: E(): 3.2e-09, 78.46% id in 65 aa. Presents a frameshift at residue 50. | 0.873 |
| DIP0151 | DIP0150 | DIP0151 | DIP0150 | Similar to Streptomyces coelicolor conserved hypothetical protein SC10F4.36c TR:Q9F3M5 (EMBL:AL450350) (94 aa) fasta scores: E(): 8.6e-07, 38.2% id in 89 aa, and to Mycobacterium tuberculosis hypothetical 11.0 kDa protein Rv3204 or MTCY07D11.22c TR:O05862 (EMBL:Z95120) (101 aa) fasta scores: E(): 0.00013, 40% id in 95 aa. | Conserved hypothetical protein; Similar to Mycobacterium tuberculosis CDC1551 conserved hypothetical protein MT0934.1 TR:AAK45182 (EMBL:AE006980) (257 aa) fasta scores: E(): 3.3e-32, 41.96% id in 255 aa. | 0.836 |
| dnaN | DIP0149 | DIP0002 | DIP0149 | DNA polymerase III, beta chain; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of r [...] | Conserved hypothetical protein (pseudogene); Pseudogene. Similar to the plasmid borne Corynebacterium striatum YtpG TR:Q9FB50 (EMBL:AF024666) (76 aa) fasta scores: E(): 3.2e-09, 78.46% id in 65 aa. Presents a frameshift at residue 50. | 0.437 |
| dnaN | recF | DIP0002 | DIP0003 | DNA polymerase III, beta chain; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of r [...] | DNA replication and repair protein; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP. | 0.979 |
| recF | DIP0149 | DIP0003 | DIP0149 | DNA replication and repair protein; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP. | Conserved hypothetical protein (pseudogene); Pseudogene. Similar to the plasmid borne Corynebacterium striatum YtpG TR:Q9FB50 (EMBL:AF024666) (76 aa) fasta scores: E(): 3.2e-09, 78.46% id in 65 aa. Presents a frameshift at residue 50. | 0.768 |
| recF | dnaN | DIP0003 | DIP0002 | DNA replication and repair protein; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP. | DNA polymerase III, beta chain; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of r [...] | 0.979 |
