STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DIP0153Hypothetical protein; No significant database matches. (208 aa)    
Predicted Functional Partners:
DIP0357
C-terminal region Similar to Deinococcus radiodurans alpha-dextran endo-1,6-alpha-glucosidase DR0405 TR:Q9RXB0 (EMBL:AE001900) (910 aa) fasta scores: E(): 3.1e-110, 41.4% id in 942 aa, and N-terminal region similar to Streptomyces lividans alpha-amylase precursor Amy SW:AMY_STRLI (Q05884) (919 aa) fasta scores: E(): 1.4e-86, 41.56% id in 676 aa; Belongs to the glycosyl hydrolase 13 family.
  
 
 0.735
DIP0152
Hypothetical protein; No significant database matches.
       0.687
DIP1674
Hypothetical protein; Very low similarity to Homo sapiens galactokinase GalK1 or GalK SW:GAL1_HUMAN (P51570) blast scores: E(): 3e-05, score: 51 24% id.
  
     0.578
DIP0976
Putative membrane protein; No significant database matches.
  
     0.519
DIP1755
Putative membrane protein; No significant database matches.
  
     0.495
DIP0019
Hypothetical protein; Doubtful CDS. No strong consensus RBS usptream. No significant database matches.
  
 
 0.484
DIP0020
Hypothetical protein; Doubtful CDS. No strong consensus RBS usptream. No significant database matches.
  
 
 0.484
DIP0532
Putative amylase; Similar to Streptomyces coelicolor alpha-glucosidase AglA TR:Q9KZ09 (EMBL:AL355752) (577 aa) fasta scores: E(): 2.2e-97, 48.09% id in 578 aa.
  
 
 0.484
DIP0533
Putative glycosilase; Similar to Bacillus coagulans oligo-1,6-glucosidase MalL SW:O16G_BACCO (Q45101) (555 aa) fasta scores: E(): 1.3e-26, 30.98% id in 539 aa.
  
 
 0.484
glgE
Putative alpha-amylase (glucanase); Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1->4)-glucans. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB.
  
 
 0.484
Your Current Organism:
Corynebacterium diphtheriae
NCBI taxonomy Id: 257309
Other names: C. diphtheriae NCTC 13129, Corynebacterium diphtheriae NCTC 13129, Corynebacterium diphtheriae NCTC13129
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.