STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DIP0155Putative secreted protein; No significant database matches. Possible secreted protein. (210 aa)    
Predicted Functional Partners:
DIP0156
Putative membrane protein; No significant database matches. Possible membrane protein.
       0.842
DIP0157
Putative secreted protein; Similar to Mycobacterium tuberculosis CDC1551 amino acid ABC transporter, amino acid-binding protein, putative MT3866 TR:AAK48230 (EMBL:AE007181) (343 aa) fasta scores: E(): 2.6e-26, 35.69% id in 311 aa.
       0.800
DIP0154
Putative endopeptidase; Similar to Mycobacterium tuberculosis CDC1551 endopeptidase, peptidase family M13 MT0208 TR:AAK44429 (EMBL:AE006930) (663 aa) fasta scores: E(): 2.9e-89, 46.97% id in 662 aa.
       0.711
Your Current Organism:
Corynebacterium diphtheriae
NCBI taxonomy Id: 257309
Other names: C. diphtheriae NCTC 13129, Corynebacterium diphtheriae NCTC 13129, Corynebacterium diphtheriae NCTC13129
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.