STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DIP0169Putative secreted protein; Similar to Treponema pallidum periplasmic zinc-binding protein TroA or TroMP1 or TP0163 SWALL:TROA_TREPA (SWALL:P96116) (308 aa) fasta scores: E(): 4.2e-29, 35.27% id in 292 aa, and to Streptococcus pneumoniae manganese ABC transporter substrate-binding lipoprotein precursor PsaA or SP1650 SWALL:P72538 (EMBL:U53509) (309 aa) fasta scores: E(): 1.6e-19, 28.47% id in 309 aa, and to Streptococcus gordonii challis coagregation-mediating adhesin precursor ScaA SW:ADHS_STRGC () (310 aa) fasta scores: E(): 1.9e-20, 30.15% id in 315 aa. Note: Also similar to the down [...] (321 aa)    
Predicted Functional Partners:
DIP0171
Putative membrane protein; Similar to Bacillus subtilis probable metal transport system membrane protein YtgC SW:YTGC_BACSU (O35024) (435 aa) fasta scores: E(): 3.1e-22, 33.91% id in 286 aa, and to Treponema pallidum zinc transport system membrane protein TroC or TP0165 SW:TROC_TREPA (P96118) (298 aa) fasta scores: E(): 1.5e-21, 35.69% id in 297 aa.
 
 0.991
DIP0170
Putative membrane protein; Similar to Bacillus subtilis probable metal transport system ATP-binding protein YtgB SW:YTGB_BACSU (O34338) (250 aa) fasta scores: E(): 5.3e-33, 45.61% id in 228 aa, and to Streptococcus gordonii challis hypothetical ABC transporter ATP-binding protein in ScaA 5'region SW:YSC1_STRGC (P42360) (251 aa) fasta scores: E(): 4.6e-30, 40.26% id in 231 aa.
 
 
 0.987
DIP0172
Putative membrane protein; Similar to Treponema pallidum zinc transport system membrane protein Trod or TP0166 SW:TROD_TREPA (P96119) (367 aa) fasta scores: E(): 3.4e-27, 35.97% id in 278 aa, and to Bacillus subtilis YtgD TR:O34500 (EMBL:AF008220) (295 aa) fasta scores: E(): 2.8e-25, 35.92% id in 270 aa.
 
 0.987
DIP0173
Putative membrane protein; Similar to Neisseria meningitidis putative periplasmic binding protein NMA0789 SWALL:Q9JVL4 (EMBL:AL162754) (308 aa) fasta scores: E(): 2.7e-24, 31.71% id in 309 aa, and to Treponema pallidum periplasmic zinc-binding protein TroA or TroMP1 or TP0163 SWALL:TROA_TREPA (SWALL:P96116) (308 aa) fasta scores: E(): 2.5e-16, 33.12% id in 317 aa, and to Streptococcus pyogenes zinc-binding protein precursor AdcA or SPY0714 SWALL:Q9A0L9 (EMBL:AE006523) (515 aa) fasta scores: E(): 2.5e-16, 28.85% id in 298 aa Note: Also similar to the upstream DIP0169, (321 aa) E(): 4.5e [...]
 
  
0.936
DIP0441
Putative membrane protein; Similar to Streptococcus gordonii challis 29 kDa membrane protein in psaA 5'region SW:P29K_STRGC (P42361) (278 aa) fasta scores: E(): 3.8e-28, 38.25% id in 264 aa.
  
 0.902
DIP0618
Similar to Lactococcus lactis manganese ABC transporter permease protein MtsC TR:Q9CFZ4 (EMBL:AE006363) (281 aa) fasta scores: E(): 3.3e-13, 27.96% id in 261 aa.
 
  
 0.865
DIP0617
Similar to Yersinia pestis chelated iron transport system membrane protein YfeC or YPO2441 SW:YFEC_YERPE (Q56954) (294 aa) fasta scores: E(): 1.6e-13, 26.81% id in 276 aa.
 
  
 0.860
DIP0616
Similar to Yersinia pestis chelated iron transport system membrane protein YfeB or YPO2440 SW:YFEB_YERPE (Q56953) (296 aa) fasta scores: E(): 1.7e-20, 37.05% id in 251 aa.
 
  
 0.832
DIP0440
Similar to Deinococcus radiodurans manganese ABC transporter, ATP-binding protein, putative DR2284 TR:Q9RS43 (EMBL:AE002060) (239 aa) fasta scores: E(): 5.3e-25, 39.57% id in 235 aa.
 
  
 0.792
DIP1486
Putative cobalamin synthesis related protein; Similar to Staphylococcus aureus (strain N315) hypothetical protein SA0410 or SAV0450 TR:BAB56612 (EMBL:AP003130) (400 aa) fasta scores: E(): 4.2e-50, 48.16% id in 326 aa, and to Pseudomonas denitrificans CobW protein SW:COBW_PSEDE (P29937) (353 aa) fasta scores: E(): 1.1e-19, 29.22% id in 349 aa.
  
  
 0.614
Your Current Organism:
Corynebacterium diphtheriae
NCBI taxonomy Id: 257309
Other names: C. diphtheriae NCTC 13129, Corynebacterium diphtheriae NCTC 13129, Corynebacterium diphtheriae NCTC13129
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