STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DIP0190Putative anti-repressor protein; Similar to Staphylococcus aureus prophage phiPV83 antirepressor TR:Q9MBT0 (EMBL:AB044554) (265 aa) fasta scores: E(): 1.5e-32, 42.8% id in 257 aa. (272 aa)    
Predicted Functional Partners:
DIP0189
Hypothetical protein; No significant database matches.
       0.773
DIP0188
Hypothetical protein; No significant database matches.
       0.567
DIP2153
Similar to Bacteriophage phi-105 holin TR:Q38456 (EMBL:L35561) (124 aa) fasta scores: E(): 5.4e-14, 41.22% id in 114 aa, and to Escherichia coli O157:H7 putative holin protein of prophage cp-933c Z1852 or ECS1595 TR:AAG55949 (EMBL:AE005328) (129 aa) fasta scores: E(): 1.7e-07, 40.77% id in 103 aa.
 
     0.461
DIP0191
Hypothetical protein; No significant database matches.
       0.436
DIP0192
Putative exported protein; No significant database matches. Possible exported protein.
       0.425
DIP0193
Hypothetical protein; No significant database matches.
       0.425
DIP0194
Hypothetical protein; No significant database matches.
       0.425
DIP0195
Hypothetical protein; No significant database matches.
       0.425
DIP0196
Hypothetical protein; No significant database matches.
       0.425
DIP0212
Immunity-specific protein Beta241; C-terminal region identical to Corynephage beta immunity-specific protein Beta241 TR:Q37919 (EMBL:L04258) (241 aa) fasta scores: E(): 3.1e-64, 100% id in 241 aa, and whole length similar to Staphylococcus aureus subspaureus Mu50 phi pvl ORF15 and 16 homologue SAV1955 TR:BAB58117 (EMBL:AP003364) (1509 aa) fasta scores: E(): 2.9e-19, 23.76% id in 1073 aa.
 
    0.424
Your Current Organism:
Corynebacterium diphtheriae
NCBI taxonomy Id: 257309
Other names: C. diphtheriae NCTC 13129, Corynebacterium diphtheriae NCTC 13129, Corynebacterium diphtheriae NCTC13129
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