STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DIP0211Putative phage protein; Similar to Bacteriophage BFK20 hypothetical 15.7 kDa protein TR:Q9MBJ3 (EMBL:AJ278322) (138 aa) fasta scores: E(): 3.2e-08, 37.09% id in 124 aa. (125 aa)    
Predicted Functional Partners:
DIP0210
Putative phage protein; N-terminal region similar to Bacteriophage BFK20 hypothetical 13.9 kDa protein TR:Q9MBJ5 (EMBL:AJ278322) (125 aa) fasta scores: E(): 1.3e-21, 50% id in 116 aa, and C-terminal region to Bacteriophage BFK20 hypothetical 14.9 kDa protein TR:Q9MBJ4 (EMBL:AJ278322) (145 aa) fasta scores: E(): 3e-10, 37.85% id in 140 aa. Note: It seems these two bacterophage proteins have been fused into DIP0210.
       0.532
DIP0207
Putative phage protein; Similar to Bacteriophage BFK20 hypothetical 19.9 kDa protein TR:Q9MBJ8 (EMBL:AJ278322) (180 aa) fasta scores: E(): 3.6e-16, 38.46% id in 156 aa.
       0.473
DIP0208
Hypothetical protein; No significant database matches.
       0.473
DIP0208A
Putative phage protein; Similar to Bacteriophage BFK20 hypothetical 10.2 kDa protein TR:Q9MBJ7 (EMBL:AJ278322) (94 aa) fasta scores: E(): 2.5e-07, 44.57% id in 83 aa.
       0.473
DIP0209
Putative phage protein; Similar to Bacteriophage BFK20 hypothetical 13.7 kDa protein TR:Q9MBJ6 (EMBL:AJ278322) (126 aa) fasta scores: E(): 1.5e-11, 37.06% id in 116 aa.
       0.473
DIP0211A
Hypothetical protein; No significant database matches.
       0.467
DIP0212
Immunity-specific protein Beta241; C-terminal region identical to Corynephage beta immunity-specific protein Beta241 TR:Q37919 (EMBL:L04258) (241 aa) fasta scores: E(): 3.1e-64, 100% id in 241 aa, and whole length similar to Staphylococcus aureus subspaureus Mu50 phi pvl ORF15 and 16 homologue SAV1955 TR:BAB58117 (EMBL:AP003364) (1509 aa) fasta scores: E(): 2.9e-19, 23.76% id in 1073 aa.
       0.453
beta201
Immunity-specific protein Beta201; Similar to the previously sequenced Corynephage beta immunity-specific protein Beta201 TR:Q37920 (EMBL:L04258) (201 aa) fasta scores: E(): 3.9e-64, 85.64% id in 202 aa. Note: there is a frameshift in the already sequenced data in from residue 167.
       0.448
beta286
Immunity-specific protein Beta286; Almost identical to previously sequenced Corynephage beta immunity-specific protein Beta286 TR:Q37921 (EMBL:L04258) (286 aa) fasta scores: E(): 1.1e-115, 99.65% id in 286 aa.
       0.448
beta371
Immunity-specific protein Beta371; Almost identical to previously sequenced Corynephage beta immunity-specific protein Beta371 beta371 TR:Q37922 (EMBL:L04258) (371 aa) fasta scores: E(): 9.9e-126, 89.75% id in 371 aa.
       0.447
Your Current Organism:
Corynebacterium diphtheriae
NCBI taxonomy Id: 257309
Other names: C. diphtheriae NCTC 13129, Corynebacterium diphtheriae NCTC 13129, Corynebacterium diphtheriae NCTC13129
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