STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DIP0329Similar to Mycobacterium tuberculosis CDC1551 opt family protein MT2465 TR:AAK46760 (EMBL:AE007086) (667 aa) fasta scores: E(): 3.6e-138, 61.18% id in 644 aa. (658 aa)    
Predicted Functional Partners:
DIP1144
Putative secreted protein; Similar to Rhizobium spTAL1145 MidA SWALL:Q9EYT2 (EMBL:AF312768) (281 aa) fasta scores: E(): 4.6e-18, 30.36% id in 247 aa, and to Escherichia coli glutamine-binding periplasmic protein precursor GlnH or B0811 or Z1033 or ECS0889 SWALL:GLNH_ECOLI (SWALL:P10344) (248 aa) fasta scores: E(): 1.1e-13, 30.55% id in 252 aa.
      
 0.566
DIP1618
Putative acyltransferase; Similar to Corynebacterium glutamicum hypothetical 27.1 kDa protein TR:Q9KKE6 (EMBL:AF096280) (245 aa) fasta scores: E(): 1.9e-67, 67.91% id in 240 aa, and to Streptomyces coelicolor putative acyltransferase 2SCG1.03 TR:Q9FCD9 (EMBL:AL391014) (240 aa) fasta scores: E(): 1.3e-37, 46.63% id in 238 aa.
      
 0.565
DIP0330
Conserved hypothetical protein; C-terminal region similar to Micromonospora viridifaciens sialidase precursor NedA SW:NANH_MICVI (Q02834) (647 aa) fasta scores: E(): 1.8e-23, 34.24% id in 403 aa.
       0.547
DIP0328
Putative membrane protein; Similar to Streptococcus pneumoniae Pap2 family protein SP0489 TR:AAK74647 (EMBL:AE007360) (216 aa) fasta scores: E(): 2.3e-06, 30.43% id in 207 aa.
       0.518
DIP0842
Putative membrane protein; No significant database matches.
  
     0.476
DIP0844
Hypothetical protein; No significant database matches.
  
     0.447
secF
Putative protein export membrane protein; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA.
  
  
 0.414
DIP0331
Conserved hypothetical protein; Similar to Klebsiella oxytoca YiaX1 TR:AAK69523 (EMBL:AF282849) (315 aa) fasta scores: E(): 4.4e-18, 31.94% id in 313 aa.
       0.404
Your Current Organism:
Corynebacterium diphtheriae
NCBI taxonomy Id: 257309
Other names: C. diphtheriae NCTC 13129, Corynebacterium diphtheriae NCTC 13129, Corynebacterium diphtheriae NCTC13129
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