STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DIP0330Conserved hypothetical protein; C-terminal region similar to Micromonospora viridifaciens sialidase precursor NedA SW:NANH_MICVI (Q02834) (647 aa) fasta scores: E(): 1.8e-23, 34.24% id in 403 aa. (687 aa)    
Predicted Functional Partners:
DIP0543
Putative sialidase precursor; Similar to Micromonospora viridifaciens sialidase precursor NedA SW:NANH_MICVI (Q02834) (647 aa) fasta scores: E(): 4e-06, 33.62% id in 455 aa. Note: Contains a potential colied-coil region at residues 518..639.
  
  
 
0.929
DIP0331
Conserved hypothetical protein; Similar to Klebsiella oxytoca YiaX1 TR:AAK69523 (EMBL:AF282849) (315 aa) fasta scores: E(): 4.4e-18, 31.94% id in 313 aa.
 
     0.866
DIP0443
Putative surface-anchored membrane protein; No significant database matches. Note: Contains a potential sortase anchor site (LPDTG) upstream of the C-terminal region transmembrane domain. Also similar to DIP0439, DIP1724, DIP0442 and DIP2325.
  
     0.648
DIP0442
Putative membrane protein; No significant database matches. Note: Also similar to DIP0439, DIP1724, DIP2325 and DIP0443.
  
     0.630
DIP0511
Conserved hypothetical protein (pseudogene; 1 probable transmembrane helix predicted for DIP0508 by TMHMM2.0; Belongs to the DapA family.
 
   
 0.607
DIP0439
Putative membrane protein; No significant database matches. Note: Also presents similarities with DIP1724, DIP0442, DIP2325 and DIP0443.
  
     0.597
DIP0329
Similar to Mycobacterium tuberculosis CDC1551 opt family protein MT2465 TR:AAK46760 (EMBL:AE007086) (667 aa) fasta scores: E(): 3.6e-138, 61.18% id in 644 aa.
       0.547
DIP2325
Putative surface-anchored protein; No significant database matches. Note: Contains a potential sortase anchor site (LAETG) upstream of the C-terminal region transmembrane domain. Also similar to DIP0439, DIP1724, DIP0442 and DIP0443.
  
     0.479
DIP0515
Similar to Escherichia coli O157:H7 EDL933 putative transport protein Z1054 TR:AAG55204 (EMBL:AE005264) (512 aa) fasta scores: E(): 4.3e-19, 24% id in 479 aa. Note: Contains a putative twin-arginine translocation (TAT) system recognition motif (RRDFFK) at the N-terminal region.
 
     0.446
DIP0519
Putative epimerase; Converts N-acetylmannosamine-6-phosphate (ManNAc-6-P) to N- acetylglucosamine-6-phosphate (GlcNAc-6-P).
 
   
 0.432
Your Current Organism:
Corynebacterium diphtheriae
NCBI taxonomy Id: 257309
Other names: C. diphtheriae NCTC 13129, Corynebacterium diphtheriae NCTC 13129, Corynebacterium diphtheriae NCTC13129
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