STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DIP0353Putative exported protein; Similar to N-terminal region of Streptococcus pneumoniae 3-hydroxy-3-methylglutaryl-CoA reductase SP1726 TR:AAK75803 (EMBL:AE007465) (424 aa) fasta scores: E(): 8.7, 26.38% id in 144 aa. (172 aa)    
Predicted Functional Partners:
DIP0352
Putative exported protein; Similar to Clostridium perfringens hypothetical 6.1 kDa protein SW:YPI8_CLOPE (P18018) (55 aa) fasta scores: E(): 1, 42.85% id in 35 aa.
       0.746
DIP0357
C-terminal region Similar to Deinococcus radiodurans alpha-dextran endo-1,6-alpha-glucosidase DR0405 TR:Q9RXB0 (EMBL:AE001900) (910 aa) fasta scores: E(): 3.1e-110, 41.4% id in 942 aa, and N-terminal region similar to Streptomyces lividans alpha-amylase precursor Amy SW:AMY_STRLI (Q05884) (919 aa) fasta scores: E(): 1.4e-86, 41.56% id in 676 aa; Belongs to the glycosyl hydrolase 13 family.
      
 0.617
DIP0358
Putative CoA-ligase; Similar to Mycobacterium tuberculosis CDC1551 substrate--CoA ligase, putative MT1470 TR:AAK45735 (EMBL:AE007017) (535 aa) fasta scores: E(): 8.6e-57, 36.1% id in 529 aa.
      
 0.617
Your Current Organism:
Corynebacterium diphtheriae
NCBI taxonomy Id: 257309
Other names: C. diphtheriae NCTC 13129, Corynebacterium diphtheriae NCTC 13129, Corynebacterium diphtheriae NCTC13129
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.