STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DIP0385Conserved hypothetical protein; Similar to Bacillus subtilis YjqA protein TR:O34593 (EMBL:Z99110) (125 aa) fasta scores: E(): 5e-11, 35.51% id in 107 aa. (121 aa)    
Predicted Functional Partners:
DIP0386
Putative ligase; Similar to Escherichia coli long-chain-fatty-acid--CoA ligase FadD or OldD or B1805 SW:LCFA_ECOLI (P29212) (561 aa) fasta scores: E(): 7.5e-62, 34.46% id in 560 aa. Possible duplication of the downstream CDS: Similar to DIP0387 (566 aa) fasta scores: E(): 1.2e-164, 73.488% identity in 562 aa overlap.
       0.773
DIP0387
Putative ligase; Similar to Escherichia coli long-chain-fatty-acid--CoA ligase FadD or OldD or B1805 SW:LCFA_ECOLI (P29212) (561 aa) fasta scores: E(): 7.8e-63, 34.69% id in 565 aa. Possible duplication of the upstream CDS: Similar to DIP0386 (568 aa) fasta scores: E(): 1.2e-164, 73.488% identity in 562 aa overlap.
       0.592
mshA
Putative glycosyl transferase; Catalyzes the transfer of a N-acetyl-glucosamine moiety to 1D-myo-inositol 3-phosphate to produce 1D-myo-inositol 2-acetamido-2- deoxy-glucopyranoside 3-phosphate in the mycothiol biosynthesis pathway.
       0.432
gpmA
Phosphoglycerate mutase 1; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate.
       0.404
Your Current Organism:
Corynebacterium diphtheriae
NCBI taxonomy Id: 257309
Other names: C. diphtheriae NCTC 13129, Corynebacterium diphtheriae NCTC 13129, Corynebacterium diphtheriae NCTC13129
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.