Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
DIP0498Similar to Streptomyces coelicolor nitrate reductase delta chain NarJ3 TR:Q9EWF5 (EMBL:AL451182) (220 aa) fasta scores: E(): 3e-20, 39.39% id in 198 aa, and to Bacillus subtilis nitrate reductase delta chain NarJ SW:NARJ_BACSU (P42178) (184 aa) fasta scores: E(): 1.9e-12, 29.14% id in 175 aa. (209 aa)    
Predicted Functional Partners:
narH
Similar to Bacillus subtilis nitrate reductase beta chain NarH SW:NARH_BACSU (P42176) (487 aa) fasta scores: E(): 1.4e-114, 56.31% id in 499 aa.
 
 
 0.999
narG
Similar to Escherichia coli respiratory nitrate reductase 1 alpha chain NarG or NarC or BisD or B1224 SW:NARG_ECOLI (P09152) (1246 aa) fasta scores: E(): 0, 46.16% id in 1237 aa; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
 
 0.999
narI
Similar to Streptomyces coelicolor putative nitrate reductase gamma chain NarI TR:O86714 (EMBL:AL031515) (240 aa) fasta scores: E(): 1e-44, 49.78% id in 237 aa, and to Bacillus subtilis nitrate reductase gamma chain NarI SW:NARI_BACSU (P42177) (223 aa) fasta scores: E(): 6.2e-33, 42.27% id in 220 aa.
 
  
 0.998
DIP0501
Putative nitrate/nitrite transport system integral membrane protein; Similar to Thermus thermophilus Nark2 TR:Q9RA45 (EMBL:AJ237974) (443 aa) fasta scores: E(): 2e-79, 50.22% id in 448 aa, and to Escherichia coli nitrite extrusion protein 2 NarU or B1469 SW:NARU_ECOLI (P37758) (462 aa) fasta scores: E(): 1.2e-31, 33.47% id in 472 aa.
 
  
 0.979
narK
Putative nitrate/nitrite transport system integral membrane protein; Similar to Thermus thermophilus NarK1 TR:Q9RA46 (EMBL:AJ237974) (435 aa) fasta scores: E(): 2e-64, 59.56% id in 418 aa, and to Escherichia coli nitrite extrusion protein 1 NarK or B1223 SW:NARK_ECOLI (P10903) (463 aa) fasta scores: E(): 5.2e-17, 27.63% id in 427 aa.
 
  
 0.848
DIP0496
Similar to part of Escherichia coli molybdate-binding periplasmic protein precursor ModA or B0763 SW:MODA_ECOLI (P37329) (257 aa) fasta scores: E(): 0.36, 31.6% id in 193 aa.
     
 0.719
DIP0493
Putative bifunctional molybdopterim biosynthesis protein; N-terminal region similar to the C-terminal region of Synechococcus sp molybdenum cofactor biosynthesis protein CB MoaCB SW:MOCB_SYNP7 (Q56208) (319 aa) fasta scores: E(): 5.2e-09, 35.06% id in 154 aa and C-terminal region similar to Mycobacterium tuberculosis molybdopterin converting factor subunit 2 MoAE or Rv3119 or MT3201 or MTCY164.29 SWALL:MOAE_MYCTU (SWALL:O05795) (147 aa) fasta scores: E(): 5.7e-11, 38.97% id in 136 aa.
  
  
 0.660
DIP0495
Putative molybdenum ABC transport system (integral membrane and ATP-binding proteins); N-terminal region similar to Mycobacterium tuberculosis molybdenum transport system permease protein ModB or Rv1858 or MT1906 or MTCY359.15c SW:MODB_MYCTU (P95156) blast scores: E(): 2e-32, score: 353 37% id, and C-terminal region to Mycobacterium tuberculosis molybdenum transport ATP-binding protein ModC or Rv1859 or MT1907 or MTCY359.14 SW:MODC_MYCTU (P95155) blast scores: E(): 1e-17, score: 93 28% id.
 
     0.649
DIP2362
Putative iron-sulphur protein; Similar to Mycobacterium smegmatis Rieske iron-sulfur protein QcrA TR:Q9XBV4 (EMBL:AF155062) (138 aa) fasta scores: E(): 1.7e-11, 40.9% id in 132 aa, and to Streptomyces coelicolor putative iron-sulphur protein SCI51.03 TR:Q9S237 (EMBL:AL109848) (131 aa) fasta scores: E(): 3.8e-10, 35.15% id in 128 aa.
 
  
 0.648
DIP0494
Conserved hypothetical protein; Similar to Mycobacterium tuberculosis CDC1551 hypothetical 24.2 kDa protein MT2696 TR:AAK47012 (EMBL:AE007102) (224 aa) fasta scores: E(): 1.3e-10, 31.37% id in 204 aa.
 
     0.637
Your Current Organism:
Corynebacterium diphtheriae
NCBI taxonomy Id: 257309
Other names: C. diphtheriae NCTC 13129, Corynebacterium diphtheriae NCTC 13129, Corynebacterium diphtheriae NCTC13129
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