STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DIP0652Putative membrane protein; Similar to Mycobacterium leprae conserved membrane protein ML1213 TR:Q9CC68 (EMBL:AL583921) (733 aa) fasta scores: E(): 1.2e-78, 38.27% id in 708 aa. (705 aa)    
Predicted Functional Partners:
DIP2175
Putative integral membrane acyltransferase; Similar to Mycobacterium tuberculosis hypothetical 43.3 kDa protein Rv0228 or MT0238 or MTCY08D5.23 TR:P96410 (EMBL:Z92669) (407 aa) fasta scores: E(): 1.2e-31, 38.84% id in 381 aa, and to Streptomyces thermotolerans macrolide antibiotics 3-O-acyltransferase AcyA TR:Q56074 (EMBL:D30759) (389 aa) fasta scores: E(): 6e-07, 30.43% id in 322 aa, and to Streptomyces mycarofaciens acyltransferase MdmB SW:MDMB_STRMY (Q00718) (387 aa) fasta scores: E(): 8e-07, 29.14% id in 398 aa. ORF overlaps with convergent downstream ORF.
  
     0.728
DIP0651
Similar to Campylobacter jejuni hypothetical protein CJ0069 TR:Q9PJ50 (EMBL:AL139074) (343 aa) fasta scores: E(): 3e-85, 61.36% id in 352 aa.
       0.451
DIP1562
Similar to Streptomyces coelicolor putative transmembrane transport protein SC5G9.26c TR:Q9RL01 (EMBL:AL117385) (420 aa) fasta scores: E(): 8e-11, 28.37% id in 437 aa, and to Streptomyces lipmanii puromycin resistance protein Pur8 SW:PUR8_STRLP (P42670) (503 aa) fasta scores: E(): 2.4e-08, 24.39% id in 455 aa.
  
     0.400
Your Current Organism:
Corynebacterium diphtheriae
NCBI taxonomy Id: 257309
Other names: C. diphtheriae NCTC 13129, Corynebacterium diphtheriae NCTC 13129, Corynebacterium diphtheriae NCTC13129
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