STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DIP0681Putative glycosyl transferase; Similar to Mycobacterium tuberculosis CDC1551 glycosyl transferase MT3365 TR:AAK47706 (EMBL:AE007146) (301 aa) fasta scores: E(): 5.1e-56, 52.12% id in 282 aa. (296 aa)    
Predicted Functional Partners:
rmlB
Similar to Mycobacterium leprae putative dTDP-(glucose or rhamnose)-4,6-dehydratase RmlB TR:Q9X7A3 (EMBL:AL049491) (331 aa) fasta scores: E(): 8.3e-84, 63.77% id in 334 aa; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
 
  
 0.792
rfbA
Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family.
 
  
 0.788
DIP0680
Conserved hypothetical protein; Similar to Mycobacterium tuberculosis CDC1551 conserved hypothetical protein MT3367 TR:AAK47708 (EMBL:AE007146) (497 aa) fasta scores: E(): 6e-73, 50.1% id in 469 aa.
 
   
 0.769
DIP0245
Putative prephenate dehydrogenase; Similar to Mycobacterium tuberculosis CDC1551 prephenate dehydrogenase MT3861 TR:AAK48225 (EMBL:AE007181) (323 aa) fasta scores: E(): 5.5e-49, 52.31% id in 281 aa, and to Bacillus subtilis prephenate dehydrogenase TyrA SW:TYRA_BACSU (P20692) (372 aa) fasta scores: E(): 2.7e-15, 31.9% id in 279 aa.
   
    0.744
apt
Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.
   
    0.744
DIP0175
Similar to Mycobacterium leprae putative ABC transporter component ML0112 SWALL:Q9CDA2 (EMBL:AL583917) (276 aa) fasta scores: E(): 1.2e-60, 55.23% id in 277 aa, and to Xylella fastidiosa ABC transporter permease protein XF2567 SWALL:Q9PAF1 (EMBL:AE004064) (267 aa) fasta scores: E(): 5.2e-37, 36.5% id in 263 aa.
 
  
 0.706
DIP0682
Similar to Mycobacterium tuberculosis CDC1551 mannose-1-phosphate guanyltransferase MT3364 TR:AAK47705 (EMBL:AE007146) (359 aa) fasta scores: E(): 1e-93, 70.45% id in 352 aa.
  
    0.665
DIP0361
Putative bifunctional protein; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose.
 
  
 0.663
DIP0679
Conserved hypothetical protein; Similar to Mycobacterium tuberculosis hypothetical 23.7 kDa protein Rv3268 or MTCY71.08 TR:P96873 (EMBL:Z92771) (229 aa) fasta scores: E(): 7.6e-11, 31.48% id in 235 aa.
       0.630
DIP0174
Similar to Mycobacterium leprae putative ABC transporter ATP-binding component ML0114 SWALL:Q9CDA0 (EMBL:AL583917) (272 aa) fasta scores: E(): 2.3e-60, 74.4% id in 254 aa, and to Xylella fastidiosa ABC transporter ATP-binding protein XF2568 SWALL:Q9PAF0 (EMBL:AE004064) (246 aa) fasta scores: E(): 1.4e-34, 45.93% id in 246 aa.
 
  
 0.576
Your Current Organism:
Corynebacterium diphtheriae
NCBI taxonomy Id: 257309
Other names: C. diphtheriae NCTC 13129, Corynebacterium diphtheriae NCTC 13129, Corynebacterium diphtheriae NCTC13129
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