STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DIP0682Similar to Mycobacterium tuberculosis CDC1551 mannose-1-phosphate guanyltransferase MT3364 TR:AAK47705 (EMBL:AE007146) (359 aa) fasta scores: E(): 1e-93, 70.45% id in 352 aa. (362 aa)    
Predicted Functional Partners:
DIP0361
Putative bifunctional protein; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose.
  
  
 0.972
DIP0274
Putative mutase; Similar to Streptomyces coelicolor putative phosphomannomutase SCK13.08c TR:Q9AD82 (EMBL:AL512667) (549 aa) fasta scores: E(): 7.9e-86, 46.75% id in 554 aa.
  
 
 0.947
DIP0687
Putative phosphomannomutase; Similar to Mycobacterium tuberculosis CDC1551 phosphomannomutase MT3355 TR:AAK47697 (EMBL:AE007145) (465 aa) fasta scores: E(): 3.1e-106, 63.27% id in 452 aa, and to Salmonella montevideo phosphomannomutase ManB or CpsG or RfbL SW:MANB_SALMO (Q01411) (456 aa) fasta scores: E(): 1.3e-53, 38.22% id in 463 aa.
  
 
 0.945
rfbA
Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family.
  
  
0.765
DIP0680
Conserved hypothetical protein; Similar to Mycobacterium tuberculosis CDC1551 conserved hypothetical protein MT3367 TR:AAK47708 (EMBL:AE007146) (497 aa) fasta scores: E(): 6e-73, 50.1% id in 469 aa.
 
     0.685
DIP0681
Putative glycosyl transferase; Similar to Mycobacterium tuberculosis CDC1551 glycosyl transferase MT3365 TR:AAK47706 (EMBL:AE007146) (301 aa) fasta scores: E(): 5.1e-56, 52.12% id in 282 aa.
  
    0.665
DIP1315
Putative membrane protein; Similar to Corynebacterium ammoniagenes RibX protein SWALL:O24754 (EMBL:AB003693) (184 aa) fasta scores: E(): 1.3e-34, 45.98% id in 187 aa, and to Mycobacterium leprae putative membrane protein ML0561 SWALL:Q9CCP2 (EMBL:AL583918) (156 aa) fasta scores: E(): 2.3e-15, 37.58% id in 141 aa.
  
 
 0.622
rmlB
Similar to Mycobacterium leprae putative dTDP-(glucose or rhamnose)-4,6-dehydratase RmlB TR:Q9X7A3 (EMBL:AL049491) (331 aa) fasta scores: E(): 8.3e-84, 63.77% id in 334 aa; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
  
  
 0.581
DIP0689
Putative mannose-phosphate isomerase; Similar to Mycobacterium tuberculosis CDC1551 mannose-6-phosphate isomerase MT3353 TR:AAK47695 (EMBL:AE007145) (408 aa) fasta scores: E(): 1.6e-57, 47.43% id in 409 aa, and to Escherichia coli mannose-6-phosphate isomerase ManA or Pmi or B1613 SW:MANA_ECOLI (P00946) (391 aa) fasta scores: E(): 1.7e-24, 38.34% id in 399 aa.
  
 
 0.580
hisS
histidyl-tRNA synthetase; Similar to Mycobacterium tuberculosis histidyl-tRNA synthetase HisS or Rv2580c or MT2657 or MTCY227.21 SWALL:SYH_MYCTU (SWALL:Q50641) (423 aa) fasta scores: E(): 1.6e-112, 70.4% id in 419 aa, and to Bacillus subtilis histidyl-tRNA synthetase HisS SWALL:SYH_BACSU (SWALL:O32039) (424 aa) fasta scores: E(): 3.8e-61, 45.63% id in 412 aa.
 
 
 0.580
Your Current Organism:
Corynebacterium diphtheriae
NCBI taxonomy Id: 257309
Other names: C. diphtheriae NCTC 13129, Corynebacterium diphtheriae NCTC 13129, Corynebacterium diphtheriae NCTC13129
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