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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DIP0727Conserved hypothetical protein; Low similarity to Mycobacterium tuberculosis CDC1551 hypothetical 31.6 kDa protein MT3288 TR:AAK47629 (EMBL:AE007141) (299 aa) fasta scores: E(): 3.9e-06, 28.12% id in 288 aa. (299 aa)    
Predicted Functional Partners:
DIP0728
Conserved hypothetical protein; Similar to Streptomyces coelicolor hypothetical 19.2 kDa protein 2SC3B6.18 TR:Q9FCJ4 (EMBL:AL390968) (168 aa) fasta scores: E(): 2e-25, 46% id in 150 aa.
       0.711
Your Current Organism:
Corynebacterium diphtheriae
NCBI taxonomy Id: 257309
Other names: C. diphtheriae NCTC 13129, Corynebacterium diphtheriae NCTC 13129, Corynebacterium diphtheriae NCTC13129
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