STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DIP0738Hypothetical protein; Doubtful CDS. No significant database matches. (55 aa)    
Predicted Functional Partners:
DIP0736
Putative protease; C-terminal region similar to Drosophila erecta trypsin zeta precursor Try-ZetA SW:TRYZ_DROER (P54630) (281 aa) fasta scores: E(): 0.17, 26.03% id in 242 aa.
       0.448
DIP0737
Putative membrane protein; No significant database matches.
       0.448
pycB
Similar to Methanococcus jannaschii pyruvate carboxylase subunit B PycB or MJ1231 SW:PYCB_METJA (Q58628) (567 aa) fasta scores: E(): 1.8e-88, 50.81% id in 490 aa, and to Propionibacterium freudenreichii shermanii biotin carboxyl carrier protein of methylmalonyl-CoA carboxyl-transferase TR:Q05618 (EMBL:L06488) (519 aa) fasta scores: E(): 1.2e-108, 66.15% id in 520 aa.
       0.420
mmdA
Similar to Propionigenium modestum methylmalonyl-CoA decarboxylase, alpha-subunit MmdA TR:O54028 (EMBL:AJ002015) (512 aa) fasta scores: E(): 2.2e-105, 54.1% id in 512 aa, and to Bacillus subtilis putative propionyl-CoA carboxylase beta chain YqjD SW:PCCB_BACSU (P54541) (506 aa) fasta scores: E(): 9.2e-91, 50.1% id in 497 aa.
       0.408
Your Current Organism:
Corynebacterium diphtheriae
NCBI taxonomy Id: 257309
Other names: C. diphtheriae NCTC 13129, Corynebacterium diphtheriae NCTC 13129, Corynebacterium diphtheriae NCTC13129
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