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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DIP0752IS element transposase; Similar to Escherichia coli possible transposase of IS1353 YahA TR:Q9WTH9 (EMBL:AP000342) (514 aa) fasta scores: E(): 2.6e-62, 41.595% id in 464 aa, and to Escherichia coli putative transposase InsK for insertion sequence element IS150 or B3558 SW:INSK_ECOLI (P19769) (283 aa) fasta scores: E(): 2.7e-35, 38.628% id in 277 aa. (459 aa)    
Predicted Functional Partners:
DIP0827
Similar to Escherichia coli probable ATP-dependent helicase Lhr or RhlF or B1653 SW:LHR_ECOLI (P30015) (1538 aa) fasta scores: E(): 1.4e-134, 46.42% id in 1579 aa.
      
 0.617
rpsA
30S ribosomal protein S1; Similar to Corynebacterium ammoniagenes 30s ribosomal protein S1 RpsA SWALL:Q9LBD0 (EMBL:AF045481) (489 aa) fasta scores: E(): 6e-160, 92.18% id in 486 aa, and to Escherichia coli 30S ribosomal protein S1 RpsA or SsyF or B0911 or Z1257 or ECS0994 SWALL:RS1_ECOLI (SWALL:P02349) (557 aa) fasta scores: E(): 2.9e-52, 44.97% id in 358 aa.
      
 0.617
DIP1423
Similar to Escherichia coli ATP-dependent helicase HrpA or B1413 SW:HRPA_ECOLI (P43329) (1300 aa) fasta scores: E(): 1.7e-172, 46.92% id in 1315 aa, and to Vibrio cholerae ATP-dependent helicase HrpA VC1382 TR:Q9KS77 (EMBL:AE004217) (1309 aa) fasta scores: E(): 2.3e-171, 47.6% id in 1317 aa.
      
 0.617
DIP0751
Hypothetical protein; Doubtful CDS. No strong consensus RBS usptream. No significant database matches.
     
 0.594
DIP0753
Similar to Staphylococcus aureus lantibiotic modifying enzyme TR:Q9S4D1 (EMBL:AF147744) (965 aa) fasta scores: E(): 5.3e-32, 21.471% id in 1006 aa, and to Lactococcus lactis Plasmid pMRC01 lacticin 481/lactococcin biosynthesis protein LcnDR2 TR:O87238 (EMBL:AE001272) (980 aa) fasta scores: E(): 2.6e-16, 21.221% id in 999 aa.
       0.513
DIP0754
Putative lantibiotic ABC-transport system membrane protein; Similar to Staphylococcus aureus transporter TR:Q9S4D0 (EMBL:AF147744) (720 aa) fasta scores: E(): 2.4e-57, 29.986% id in 707 aa, and to Lactococcus lactis cytolysin B transport protein TR:O87239 (EMBL:AE001272) (708 aa) fasta scores: E(): 7.1e-55, 28.571% id in 714 aa.
       0.513
DIP0755
Putative lantibiotic ABC-transport system, ATP-binding protein; Similar to Bacillus subtilis SpaF TR:Q45404 (EMBL:U09819) (247 aa) fasta scores: E(): 2.2e-22, 42.991% id in 214 aa, and to Corynebacterium jeikeium BlsD TR:AAK94047 (EMBL:AF401314) (301 aa) fasta scores: E(): 2.5e-22, 33.106% id in 293 aa.
       0.513
DIP0756
Similar to Streptomyces coelicolor putative ABC transporter integral membrane protein SCE8.16c TR:Q9Z4W1 (EMBL:AL035654) (264 aa) fasta scores: E(): 0.0032, 26.695% id in 236 aa, and to Corynebacterium jeikeium BlsC TR:AAK94048 (EMBL:AF401314) (247 aa) fasta scores: E(): 0.81, 21.116% id in 251 aa.
       0.513
Your Current Organism:
Corynebacterium diphtheriae
NCBI taxonomy Id: 257309
Other names: C. diphtheriae NCTC 13129, Corynebacterium diphtheriae NCTC 13129, Corynebacterium diphtheriae NCTC13129
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