STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DIP0757IS element transposase (partial); Similar to part of Yersinia enterocolitica IS1222-like transposase TR:Q9X9I1 (EMBL:AJ132945) (165 aa) fasta scores: E(): 5.3e-08, 40.625% id in 64 aa, and of Xanthomonas campestris insertion element IS476 hypothetical 39.2 kDa protein SW:YI61_XANCA (P25438) (346 aa) fasta scores: E(): 3.3e-06, 34.722% id in 72 aa. Also similar to the C-terminal region of DIP0760, Putative transposase (pseudogene) (361 aa) fasta scores: E(): 9.6e-27, 80.000% identity in 70 aa overlap. (88 aa)    
Predicted Functional Partners:
DIP0757A
IS element transposase (partial); Similar to part of Salmonella typhimurium LT2 putative integrase core domain STM2764 TR:AAL21650 (EMBL:AE008826) (155 aa) fasta scores: E(): 0.94, 36.36% id in 44 aa.
       0.605
Your Current Organism:
Corynebacterium diphtheriae
NCBI taxonomy Id: 257309
Other names: C. diphtheriae NCTC 13129, Corynebacterium diphtheriae NCTC 13129, Corynebacterium diphtheriae NCTC13129
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