STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DIP0758Putative transposase (partial); Similar to part of Mycobacterium ulcerans probable transposase Tnp TR:Q9ZG97 (EMBL:AF082836) (444 aa) fasta scores: E(): 1.5e-08, 50% id in 82 aa. (112 aa)    
Predicted Functional Partners:
DIP0757A
IS element transposase (partial); Similar to part of Salmonella typhimurium LT2 putative integrase core domain STM2764 TR:AAL21650 (EMBL:AE008826) (155 aa) fasta scores: E(): 0.94, 36.36% id in 44 aa.
       0.447
Your Current Organism:
Corynebacterium diphtheriae
NCBI taxonomy Id: 257309
Other names: C. diphtheriae NCTC 13129, Corynebacterium diphtheriae NCTC 13129, Corynebacterium diphtheriae NCTC13129
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