STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DIP0794Na(+)/H(+) antiporter homolog; Similar to Streptomyces coelicolor putative integral membrane efflux protein SCE39.29 TR:Q9X8F2 (EMBL:AL049573) (404 aa) fasta scores: E(): 7.7e-37, 35.500% id in 400 aa, and to Enterococcus hirae Na(+)/H(+) antiporter NapA SW:NAPA_ENTHR (P26235) (383 aa) fasta scores: E(): 7.5e-12, 21.964% id in 387 aa. (399 aa)    
Predicted Functional Partners:
DIP0793
Putative secreted protein; Similar to Mycobacterium tuberculosis CDC1551 conserved hypothetical protein MT2601 TR:AAK46909 (EMBL:AE007096) (240 aa) fasta scores: E(): 4.3e-31, 46.31% id in 244 aa. Note: Contains a putative twin-arginine translocation (TAT) system recognition motif (RRSFLT) at the N-terminal region.
       0.519
DIP1750
Similar to Vibrio cholerae glutathione-regulated potassium-efflux system protein KefB, putative VC0992 TR:Q9KTB1 (EMBL:AE004180) (528 aa) fasta scores: E(): 1.3e-37, 33.26% id in 514 aa; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family.
     
 0.440
DIP0795
Hypothetical protein; No significant database matches.
       0.419
DIP0796
Putative phage protein; Similar to bacteriophage bIL311 ORF21 TR:Q9AZG0 (EMBL:AF323672) (306 aa) fasta scores: E(): 0.048, 28.030% id in 132 aa.
       0.414
Your Current Organism:
Corynebacterium diphtheriae
NCBI taxonomy Id: 257309
Other names: C. diphtheriae NCTC 13129, Corynebacterium diphtheriae NCTC 13129, Corynebacterium diphtheriae NCTC13129
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