STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DIP0899Conserved hypothetical protein; Low similarity to parts of Mycobacterium tuberculosis CDC1551 conserved hypothetical protein MT0103 TR:AAK44326 (EMBL:AE006921) (287 aa) fasta scores: E(): 5.6e-09, 39.04% id in 105 aa. (171 aa)    
Predicted Functional Partners:
DIP1733
Hypothetical protein; No significant database matches.
  
    0.727
DIP0268
Conserved hypothetical protein; C-terminal region similar to C-terminal region of Mycobacterium tuberculosis hypothetical 58.9 kDa protein Rv2100 precursor or MT2160 or MTCY49.40 SW:YL00_MYCTU (Q10709) (550 aa) fasta scores: E(): 7.5e-09, 35.11% id in 131 aa.
  
     0.726
DIP1861
Hypothetical protein; No significant database matches to the full length CDS. C-terminus is similar to an internal region of Mycobacterium tuberculosis hypothetical protein Rv2100 SW:YL00_MYCTU (Q10709) (550 aa) fasta scores: E(): 9.8e-09, 35.15% id in 128 aa.
  
     0.720
DIP0622
Putative membrane protein; No significant database matches.
  
     0.713
DIP0419
Conserved hypothetical protein; Low similarity in parts to Mycobacterium tuberculosis hypothetical 58.9 kDa protein precursor Rv2100 or MT2160 or MTCY49.40 SW:YL00_MYCTU (Q10709) (550 aa) fasta scores: E(): 1.7e-06, 32.57% id in 132 aa.
  
    0.696
DIP1503
Putative membrane protein; Similar to Mycobacterium tuberculosis CDC1551 conserved hypothetical protein MT3867 TR:AAK48231 (EMBL:AE007181) (117 aa) fasta scores: E(): 1.1e-09, 47.25% id in 91 aa.
  
     0.615
DIP0898
Hypothetical protein (putative DNA binding protein); No significant database matches.
       0.542
DIP2009
Putative peptide synthase; N-terminal region similar to C-terminal region of Streptomyces lavendulae peptide synthetase SWALL:AAK81825 (EMBL:AF386507) (1531 aa) fasta scores: E(): 1.3e-38, 34.02% id in 814 aa, similar in its full length to Agrobacterium tumefaciens StrC58 AGR_l_3476p SWALL:AAK90311 (EMBL:AE008376) (1344 aa) fasta scores: E(): 6.2e-36, 32.96% id in 1338 aa, and N-terminal region similar to the full length of Amycolatopsis orientalis PCZA361.18 SWALL:O52803 (EMBL:AJ223998) (580 aa) fasta scores: E(): 1.3e-33, 38.2% id in 589 aa. C-terminal region presents low similarity [...]
  
     0.523
DIP0103
Similar to Mycobacterium leprae hypothetical protein ML2114 TR:Q9CBE3 (EMBL:AL583924) (56 aa) fasta scores: E(): 1.7e-05, 52.08% id in 48 aa.
  
     0.507
DIP1447
Putative membrane protein; Low similarity to Mycobacterium tuberculosis CDC1551 hypothetical 19.3 kDa protein MT2802.1 TR:AAK47121 (EMBL:AE007108) (180 aa) fasta scores: E(): 3.3e-07, 25.68% id in 183 aa.
  
     0.471
Your Current Organism:
Corynebacterium diphtheriae
NCBI taxonomy Id: 257309
Other names: C. diphtheriae NCTC 13129, Corynebacterium diphtheriae NCTC 13129, Corynebacterium diphtheriae NCTC13129
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.