STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DIP0933Conserved hypothetical protein; Similar to Streptomyces coelicolor hypothetical 14.7 kDa protein 2SCG38.16 TR:Q9EX03 (EMBL:AL445503) (132 aa) fasta scores: E(): 1.2e-18, 53.39% id in 103 aa. (114 aa)    
Predicted Functional Partners:
DIP0934
Conserved hypothetical protein; Low similarity to Streptomyces coelicolor putative regulatory protein 2SCG38.15c TR:Q9EX04 (EMBL:AL445503) (278 aa) fasta scores: E(): 2.1e-10, 28.39% id in 236 aa.
 
   
 0.945
DIP0935
Similar to Alcaligenes faecalis phosphinothricin N-acetyltransferase Bar SW:PAT_ALCFA (P31668) (197 aa) fasta scores: E(): 7.8e-08, 31.176% identity in 170 aa overlap and to Streptomyces coelicolor phosphinothricin N-acetyltransferase Bar or SCE22.20 SW:PAT_STRCO (P21861) (171 aa) fasta scores: E(): 5.3e-07, 25.56% id in 176 aa.
       0.609
DIP1978
Putative exported protein; Similar to Mycobacterium tuberculosis hypothetical protein Rv3587c TR:O53572 (EMBL:AL022075) (264 aa) fasta scores: E(): 2.9e-10, 29.13% id in 230 aa, and to Mycobacterium leprae hypothetical membrane protein ML1918 TR:Q9CBJ2 (EMBL:AL583923) (263 aa) fasta scores: E(): 1e-08, 28.69% id in 230 aa.
  
     0.505
DIP0357
C-terminal region Similar to Deinococcus radiodurans alpha-dextran endo-1,6-alpha-glucosidase DR0405 TR:Q9RXB0 (EMBL:AE001900) (910 aa) fasta scores: E(): 3.1e-110, 41.4% id in 942 aa, and N-terminal region similar to Streptomyces lividans alpha-amylase precursor Amy SW:AMY_STRLI (Q05884) (919 aa) fasta scores: E(): 1.4e-86, 41.56% id in 676 aa; Belongs to the glycosyl hydrolase 13 family.
  
     0.453
DIP2051
Similar to Mycobacterium leprae putative membrane protein MLCB1450.21c SWALL:Q9ZBL6 (EMBL:AL035159) (403 aa) fasta scores: E(): 3.4e-22, 32.51% id in 406 aa, and to Mycobacterium tuberculosis hypothetical 47.1 kDa protein Rv0412c or MT0425 or MTCY22G10.08c SWALL:AAK44649 (EMBL:Z84724) (439 aa) fasta scores: E(): 3.1e-21, 33.09% id in 414 aa.
  
     0.426
DIP0638
Conserved hypothetical protein; Low similarity to C-terminal region of Streptomyces coelicolor putative adenosine deaminase SC5H1.24c TR:Q9X7T2 (EMBL:AL049863) (359 aa) fasta scores: E(): 2.1e-06, 28.88% id in 225 aa.
  
     0.409
Your Current Organism:
Corynebacterium diphtheriae
NCBI taxonomy Id: 257309
Other names: C. diphtheriae NCTC 13129, Corynebacterium diphtheriae NCTC 13129, Corynebacterium diphtheriae NCTC13129
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.