STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DIP0934Conserved hypothetical protein; Low similarity to Streptomyces coelicolor putative regulatory protein 2SCG38.15c TR:Q9EX04 (EMBL:AL445503) (278 aa) fasta scores: E(): 2.1e-10, 28.39% id in 236 aa. (226 aa)    
Predicted Functional Partners:
DIP0933
Conserved hypothetical protein; Similar to Streptomyces coelicolor hypothetical 14.7 kDa protein 2SCG38.16 TR:Q9EX03 (EMBL:AL445503) (132 aa) fasta scores: E(): 1.2e-18, 53.39% id in 103 aa.
 
   
 0.945
DIP0935
Similar to Alcaligenes faecalis phosphinothricin N-acetyltransferase Bar SW:PAT_ALCFA (P31668) (197 aa) fasta scores: E(): 7.8e-08, 31.176% identity in 170 aa overlap and to Streptomyces coelicolor phosphinothricin N-acetyltransferase Bar or SCE22.20 SW:PAT_STRCO (P21861) (171 aa) fasta scores: E(): 5.3e-07, 25.56% id in 176 aa.
       0.702
DIP2107
Similar to Streptomyces coelicolor putative integral membrane transport protein SCD10.28c TR:Q9K3U9 (EMBL:AL359988) (550 aa) fasta scores: E(): 6.2e-18, 25.27% id in 542 aa. Lies alongside a putative ABC transporter ATP-binding subunit.
  
     0.652
DIP1978
Putative exported protein; Similar to Mycobacterium tuberculosis hypothetical protein Rv3587c TR:O53572 (EMBL:AL022075) (264 aa) fasta scores: E(): 2.9e-10, 29.13% id in 230 aa, and to Mycobacterium leprae hypothetical membrane protein ML1918 TR:Q9CBJ2 (EMBL:AL583923) (263 aa) fasta scores: E(): 1e-08, 28.69% id in 230 aa.
  
     0.616
DIP2324
Similar to Streptomyces coelicolor putative ABC transport system transmembrane protein SC10A9.10c SWALL:Q9AK94 (EMBL:AL583943) (379 aa) fasta scores: E(): 4.3e-17, 38.94% id in 380 aa. Lies alongside a putative ABC transporter ATP-binding subunit.
  
     0.495
DIP1410
Putative membrane protein; No significant database matches.
  
     0.434
DIP0383
Conserved hypothetical protein; Low similarity to Mycobacterium tuberculosis hypothetical 19.1 kDa protein Rv0481c or MT0499 or MTCY20G9.07c SW:Y481_MYCTU (Q11147) (174 aa) fasta scores: E(): 0.028, 23.92% id in 163 aa.
  
     0.430
DIP2051
Similar to Mycobacterium leprae putative membrane protein MLCB1450.21c SWALL:Q9ZBL6 (EMBL:AL035159) (403 aa) fasta scores: E(): 3.4e-22, 32.51% id in 406 aa, and to Mycobacterium tuberculosis hypothetical 47.1 kDa protein Rv0412c or MT0425 or MTCY22G10.08c SWALL:AAK44649 (EMBL:Z84724) (439 aa) fasta scores: E(): 3.1e-21, 33.09% id in 414 aa.
  
     0.428
DIP1004
Conserved hypothetical protein; Similar to Mycobacterium tuberculosis hypothetical 27.6 kDa protein Rv1249c or MTV006.21c TR:O50464 (EMBL:AL021006) (262 aa) fasta scores: E(): 2.1e-15, 31.57% id in 209 aa.
  
     0.418
DIP1889
Similar to Streptomyces coelicolor putative transcriptional regulator SC2G5.15C TR:Q9Z5A8 (EMBL:AL035478) (279 aa) fasta scores: E(): 9.5e-35, 44.89% id in 274 aa, and to Rhizobium meliloti putative transcription regulator protein SMC03015 TR:CAC45219 (EMBL:AL591784) (245 aa) fasta scores: E(): 0.012, 25.55% id in 227 aa.
  
    0.416
Your Current Organism:
Corynebacterium diphtheriae
NCBI taxonomy Id: 257309
Other names: C. diphtheriae NCTC 13129, Corynebacterium diphtheriae NCTC 13129, Corynebacterium diphtheriae NCTC13129
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