Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
DIP0947Putative sodium-dependent ABC transport system membrane protein; Similar to Pasteurella multocida hypothetical protein PM0718 TR:Q9CMU0 (EMBL:AE006109) (502 aa) fasta scores: E(): 6.7e-106, 57.72% id in 492 aa, and to Haemophilus influenzae hypothetical sodium-dependent transporter HI0736 SW:Y736_HAEIN (P44849) (508 aa) fasta scores: E(): 2.9e-104, 55.17% id in 502 aa; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family. (549 aa)    
Predicted Functional Partners:
DIP0946
Putative secreted protein; No significant database matches.
  
  
 0.851
lysI
L-Lysine transport protein; Similar to Corynebacterium glutamicum L-Lysine transport protein LysI SW:LYSI_CORGL (P35865) (501 aa) fasta scores: E(): 9.3e-131, 69.85% id in 491 aa.
  
 
 0.695
DIP0945
Putative membrane protein; Similar to Streptomyces coelicolor integral membrane protein SCF6.09 TR:Q9RJL9 (EMBL:AL121849) (363 aa) fasta scores: E(): 2e-46, 44.73% id in 342 aa, and to Escherichia coli putative permease perm PerM or B2493 or Z3755 or ECS3355 SW:PERM_ECOLI (P77406) (353 aa) fasta scores: E(): 4.7e-17, 29.2% id in 339 aa.
 
    0.640
DIP0944
Putative membrane protein; No significant database matches.
     
 0.602
ychF
Putative ABC transport system ATP-binding protein; ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner.
       0.549
DIP2108
Putative integral membrane protein; Weakly similar to many eg. Pseudomonas aeruginosa sodium/glutamate symporter GltS or PA3176 TR:Q9HZ58 (EMBL:AE004741) (404 aa) fasta scores: E(): 2.2e-06, 23.83% id in 365 aa, and to Escherichia coli sodium/glutamate symport carrier protein GltS or GltC or B3653 SW:GLTS_ECOLI (P19933) (401 aa) fasta scores: E(): 0.097, 22.36% id in 398 aa.
  
   
 0.443
putP
Sodium/proline symporter; Catalyzes the sodium-dependent uptake of extracellular L- proline; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
 
  
 0.409
Your Current Organism:
Corynebacterium diphtheriae
NCBI taxonomy Id: 257309
Other names: C. diphtheriae NCTC 13129, Corynebacterium diphtheriae NCTC 13129, Corynebacterium diphtheriae NCTC13129
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