STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DIP0953Putative ABC transport system ATP-binding protein; Similar to Staphylococcus aureus (strain N315) SA0928 protein or SAV1076 TR:BAB57238 (EMBL:AP003132) (466 aa) fasta scores: E(): 6.9e-32, 34.18% id in 433 aa. (459 aa)    
Predicted Functional Partners:
DIP0954
Putative ABC transport system membrane protein; Low similarity to Bacillus subtilis YkoC TR:O34572 (EMBL:AJ002571) (254 aa) fasta scores: E(): 1.3e-06, 24.48% id in 241 aa.
 
 0.998
DIP0955
Hypothetical protein; No significant database matches.
 
  
 0.848
DIP2342
Similar to Streptomyces coelicolor putative integral membrane transport protein SCE87.11 SWALL:Q9RKC7 (EMBL:AL132674) (253 aa) fasta scores: E(): 0.082, 26.54% id in 226 aa.
 
 
 0.840
DIP0951
Putative membrane protein; Similar to Bacillus subtilis YkoE TR:O34738 (EMBL:AJ002571) (199 aa) fasta scores: E(): 5.8e-16, 39.36% id in 188 aa.
 
    0.813
DIP1454
Putative membrane protein; Similar to Deinococcus radiodurans conserved hypothetical protein DR2468 TR:Q9RRM0 (EMBL:AE002076) (198 aa) fasta scores: E(): 7.8e-15, 36.18% id in 199 aa, and to Rhizobium meliloti hypothetical transmembrane protein SMC00963 TR:CAC45461 (EMBL:AL591785) (201 aa) fasta scores: E(): 2.5e-07, 29.38% id in 194 aa.
  
 
 0.713
DIP1452
Putative membrane protein; Similar to Streptococcus pyogenes putative biotin synthase SPY0207 TR:Q9A1L4 (EMBL:AE006489) (179 aa) fasta scores: E(): 2e-15, 37.57% id in 173 aa, and to Rhizobium meliloti hypothetical transmembrane protein SMC00964 TR:CAC45460 (EMBL:AL591785) (187 aa) fasta scores: E(): 2.7e-14, 37.43% id in 179 aa.
   
 
 0.670
DIP0959
Similar in its full length to Mycobacterium tuberculosis putative peptide ABC transporter ATP-binding protein Rv3663c or MTV025.011c TR:O69631 (EMBL:AL022121) (548 aa) fasta scores: E(): 4.5e-100, 58.27% id in 544 aa, and N-terminal region and C-termianl region both similar to Bacillus subtilis oligopeptide transport ATP-binding protein OppD or Spo0KD SW:OPPD_BACSU (P24136) (358 aa) fasta scores: E(): 3.1e-38, 46.56% id in 262 aa.
  
  
0.502
DIP2343
Similar to Streptomyces coelicolor putative ABC transporter ATP-binding subunit SCC53.15 SWALL:Q9KXJ6 (EMBL:AL357591) (563 aa) fasta scores: E(): 1.9e-05, 26.87% id in 439 aa, and to Methanobacterium thermoautotrophicum cobalt transport ATP-binding protein CbiO SWALL:Q50801 (EMBL:X94292) (277 aa) fasta scores: E(): 0.00012, 30.4% id in 171 aa.
 
  
0.421
DIP0956
Putative peptide transport system secreted protein; Similar to Corynebacterium glutamicum ABC-type transporter, periplasmic component CGL1990 SWALL:Q8NP35 (EMBL:AP005280) (534 aa) fasta scores: E(): 7.8e-143, 66.79% id in 533 aa, and to Mycobacterium tuberculosis putative peptide transport system secreted peptide-binding protein Rv3666c or MTV025.014c or MT3767 SWALL:O69634 (EMBL:AL022121) (541 aa) fasta scores: E(): 6.8e-75, 49.06% id in 534 aa, and to Bacillus subtilis dipeptide-binding protein precursor DppE or DciAE SWALL:DPPE_BACSU (SWALL:P26906) (543 aa) fasta scores: E(): 1.2e-1 [...]
       0.418
DIP0952
Similar to Neisseria meningitidis chloride channel protein-related protein NMB0982 TR:Q9JZM8 (EMBL:AE002449) (380 aa) fasta scores: E(): 1.4e-21, 31.25% id in 352 aa.
       0.407
Your Current Organism:
Corynebacterium diphtheriae
NCBI taxonomy Id: 257309
Other names: C. diphtheriae NCTC 13129, Corynebacterium diphtheriae NCTC 13129, Corynebacterium diphtheriae NCTC13129
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