STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DIP0999Conserved hypothetical protein; Similar to Mycobacterium tuberculosis CDC1551 hypothetical 47.3 kDa protein MT1270 TR:AAK45528 (EMBL:AE007003) (435 aa) fasta scores: E(): 5e-77, 52.51% id in 417 aa. (429 aa)    
Predicted Functional Partners:
DIP0998
Putative membrane protein; Similar to Mycobacterium tuberculosis hypothetical 20.4 kDa protein Rv1231c or MTV006.03c TR:O86314 (EMBL:Z98260) (180 aa) fasta scores: E(): 4.5e-31, 60.81% id in 148 aa.
 
     0.946
DIP0997
Putative ATP-binding protein; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.
       0.831
DIP1000
Similar to Mycobacterium tuberculosis hypothetical 18.6 kDa protein Rv1234 or MTV006.06 TR:O50451 (EMBL:AL021006) (175 aa) fasta scores: E(): 2.9e-27, 56.42% id in 140 aa.
       0.691
DIP1001
Putative exported protein; No database matches.
  
    0.688
DIP1215
Similar to Mycobacterium tuberculosis putative magnesium and cobalt transport protein CorA or Rv1239c or MT1277 or MTV006.11c SWALL:O50455 (EMBL:AL021006) (366 aa) fasta scores: E(): 1.9e-59, 43.45% id in 359 aa, and to Escherichia coli magnesium and cobalt transport protein CorA or B3816 or Z5333 or ECS4746 SWALL:CORA_ECOLI (SWALL:P27841) (316 aa) fasta scores: E(): 3e-05, 24.03% id in 312 aa.
     
 0.545
Your Current Organism:
Corynebacterium diphtheriae
NCBI taxonomy Id: 257309
Other names: C. diphtheriae NCTC 13129, Corynebacterium diphtheriae NCTC 13129, Corynebacterium diphtheriae NCTC13129
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.