STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DIP1008Hypothetical protein; No significant database matches. (269 aa)    
Predicted Functional Partners:
DIP1007
Similar to Bacillus spBP-7. type B carboxylesterase EstA1 TR:Q9L378 (EMBL:AJ278066) (486 aa) fasta scores: E(): 3.2e-47, 34% id in 500 aa, and to Bacillus subtilis para-nitrobenzyl esterase PnbA SW:PNBA_BACSU (P37967) (489 aa) fasta scores: E(): 3.3e-49, 33.93% id in 501 aa; Belongs to the type-B carboxylesterase/lipase family.
       0.799
DIP0967
Putative secreted protein; Similar to Mycobacterium tuberculosis CDC1551 hypothetical 36.6 kDa protein MT1193 TR:AAK45450 (EMBL:AE006997) (371 aa) fasta scores: E(): 7.8e-15, 33.91% id in 230 aa.
   
    0.744
DIP1009
Hypothetical protein; No significant database matches.
       0.742
DIP1006
Similar to Deinococcus radiodurans shikimate 5-dehydrogenase, putative DR0077 TR:Q9RY73 (EMBL:AE001871) (273 aa) fasta scores: E(): 1.2e-48, 54.3% id in 267 aa, and to Haemophilus influenzae hypothetical shikimate 5-dehydrogenase-like protein Hi0607 hi0607 SW:YDIB_HAEIN (P44774) (271 aa) fasta scores: E(): 1.4e-45, 49.25% id in 268 aa, and to Escherichia coli hypothetical shikimate 5-dehydrogenase-like protein ydib ydib or B1692 SW:YDIB_ECOLI (P28244) (288 aa) fasta scores: E(): 1.9e-09, 30.03% id in 263 aa.
       0.683
Your Current Organism:
Corynebacterium diphtheriae
NCBI taxonomy Id: 257309
Other names: C. diphtheriae NCTC 13129, Corynebacterium diphtheriae NCTC 13129, Corynebacterium diphtheriae NCTC13129
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.