STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DIP1029Similar to Streptomyces coelicolor putative membrane protein 2SCK8.29C TR:Q9AK23 (EMBL:AL589164) (67 aa) fasta scores: E(): 1.6e-05, 37.03% id in 54 aa, and to Thermotoga maritima conserved hypothetical protein TM1156 TR:Q9X0P0 (EMBL:AE001773) (129 aa) fasta scores: E(): 0.00055, 37.5% id in 56 aa. (66 aa)    
Predicted Functional Partners:
DIP2282
Conserved hypothetical protein; Similar to Mycobacterium tuberculosis 35 kDa protein Rv2744c or MT2815 or MTV002.09c SWALL:35KD_MYCTU (SWALL:P31511) (270 aa) fasta scores: E(): 8.4e-29, 45.52% id in 257 aa.
  
 
 0.954
DIP0598
Putative membrane protein; No significant database matches.
      
 0.862
DIP1455
Conserved hypothetical protein; Similar in its full length to Mycobacterium tuberculosis 35 kDa protein Rv2744c or MT2815 or MTV002.09c SW:35KD_MYCTU (P31511) (270 aa) fasta scores: E(): 1.2e-51, 75.8% id in 248 aa, N-terminal region to Mycobacterium leprae B2235_C2_187 MLCB33.06c TR:Q49840 (EMBL:U00019) (167 aa) fasta scores: E(): 2.9e-27, 72.1% id in 147 aa, and C-terminal region to Mycobacterium leprae B2235_C3_214 MLCB33.05c TR:Q49845 (EMBL:U00019) (114 aa) fasta scores: E(): 3.4e-12, 58.18% id in 110 aa.
  
 
 0.716
DIP1028
Similar to Streptomyces coelicolor putative MarR-family transcriptional repressor SCE22.22 TR:Q9KYU1 (EMBL:AL355832) (163 aa) fasta scores: E(): 3.5e-17, 37.06% id in 143 aa, and to Escherichia coli transcriptional repressor MprA EmrR or B2684 or Z3985 or ECS3546 SW:MPRA_ECOLI (P24201) (176 aa) fasta scores: E(): 0.0011, 24.79% id in 121 aa.
       0.681
DIP1939
Putative membrane protein; Similar to the N-terminus of Thermotoga maritima conserved hypothetical protein TM1156 TR:Q9X0P0 (EMBL:AE001773) (129 aa) fasta scores: E(): 5.1e-05, 39.34% id in 61 aa, and to the full length Bacillus subtilis hypothetical protein YvlC TR:O34719 (EMBL:AF017113) (65 aa) fasta scores: E(): 0.00018, 41.37% id in 58 aa.
  
     0.535
DIP0856
Putative serine protease; Similar to Mycobacterium tuberculosis putative serine protease Rv0983 or MTV044.11 SWALL:O53896 (EMBL:AL021999) (464 aa) fasta scores: E(): 3.8e-46, 43.84% id in 406 aa, and to Brucella abortus probable serine protease do-like precursor DegP or HtrA SWALL:DEGP_BRUAB (SWALL:Q44597) (513 aa) fasta scores: E(): 7.6e-25, 44.56% id in 285 aa.
   
  
 0.505
DIP1027
Conserved hypothetical protein; Similar to Streptomyces coelicolor hypothetical 20.0 kDa protein SC1C2.14C TR:O86515 (EMBL:AL031124) (185 aa) fasta scores: E(): 1e-29, 48.04% id in 179 aa, and to Thermoplasma volcanium hypothetical protein Tvg0219791 TR:BAB59353 (EMBL:AP000991) (177 aa) fasta scores: E(): 2.4e-28, 50.93% id in 161 aa; Belongs to the UPF0312 family.
       0.457
DIP0599
Similar to Streptomyces coelicolor putative two-component system sensor kinase SCD63A.02 TR:Q9KY73 (EMBL:AL356832) (430 aa) fasta scores: E(): 3e-12, 37.09% id in 434 aa.
  
    0.404
Your Current Organism:
Corynebacterium diphtheriae
NCBI taxonomy Id: 257309
Other names: C. diphtheriae NCTC 13129, Corynebacterium diphtheriae NCTC 13129, Corynebacterium diphtheriae NCTC13129
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