STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DIP1149Putative transport protein; Similar to Pasteurella multocida hypothetical protein PM0933 SWALL:Q9CMA1 (EMBL:AE006132) (462 aa) fasta scores: E(): 9.1e-43, 32.62% id in 469 aa, and to Escherichia coli anaerobic C4-dicarboxylate transporter DcuC or B0621 or Z0766 or ECS0660 SWALL:DCUC_ECOLI (SWALL:Q47134) (461 aa) fasta scores: E(): 9.6e-19, 31.76% id in 466 aa. (470 aa)    
Predicted Functional Partners:
dcuB
Similar to Escherichia coli anaerobic C4-dicarboxylate transporter DcuB or GenF or B4123 or Z5725 or ECS5105 SWALL:DCUB_ECOLI (SWALL:P14409) (446 aa) fasta scores: E(): 4.3e-91, 54.5% id in 444 aa, and to Wolinella succinogenes C4-dicarboxylate membrane transporter DcuB SWALL:Q9ZEN8 (EMBL:AJ131242) (452 aa) fasta scores: E(): 4e-94, 54.12% id in 449 aa.
  
   
 0.727
dcuA
Similar to Escherichia coli anaerobic C4-dicarboxylate transporter DcuA or GenA or B4138 or Z5743 or ECS5119 SWALL:DCUA_ECOLI (SWALL:P04539) (433 aa) fasta scores: E(): 3.1e-92, 57.33% id in 436 aa, and to Vibrio cholerae C4-dicarboxylate transporter, anaerobic VC2699 SWALL:Q9KNN2 (EMBL:AE004335) (451 aa) fasta scores: E(): 7e-95, 63.15% id in 437 aa.
  
   
 0.716
ptsG
Similar to Corynebacterium glutamicum PTS system, glucose-specific IIABC component PtsG SWALL:PTGA_CORGL (SWALL:Q45298) (674 aa) fasta scores: E(): 2.8e-59, 44.91% id in 688 aa, and to Staphylococcus xylosus PTS system, sucrose-specific IIBC component ScrA SWALL:PTSB_STAXY (SWALL:P51184) (480 aa) fasta scores: E(): 8e-26, 27.73% id in 494 aa.
     
 0.480
DIP1150
Similar to Bacillus subtilis transcription antiterminator LicT or N15A SWALL:LICT_BACSU (SWALL:P39805) (277 aa) fasta scores: E(): 2.6e-20, 28.72% id in 275 aa, and to Escherichia coli cryptic beta-glucoside Bgl operon antiterminator BglG or BglC or B3723 SWALL:BGLG_ECOLI (SWALL:P11989) (278 aa) fasta scores: E(): 1.4e-18, 27.33% id in 278 aa.
       0.435
Your Current Organism:
Corynebacterium diphtheriae
NCBI taxonomy Id: 257309
Other names: C. diphtheriae NCTC 13129, Corynebacterium diphtheriae NCTC 13129, Corynebacterium diphtheriae NCTC13129
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