STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DIP1252Low similarity to Caulobacter crescentus virulence-associated protein, putative CC2867 SWALL:Q9A4G7 (EMBL:AE005951) (104 aa) fasta scores: E(): 0.00032, 29.26% id in 82 aa, and to Bacteroides nodosus virulence-associated protein I VapI SWALL:VAPI_BACNO (SWALL:Q46560) (108 aa) fasta scores: E(): 0.0023, 27.58% id in 87 aa. (89 aa)    
Predicted Functional Partners:
DIP0370
Low similarity to Bacillus pseudofirmus succinate dehydrogenease cytochrome B-558 subunit DhsC SWALL:O54447 (EMBL:U91843) (159 aa) fasta scores: E(): 0.011, 28.22% id in 163 aa, and to Streptomyces coelicolor putative cytochrome B subunit SCM10.12c TR:Q9RCY6 (EMBL:AL133469) (243 aa) fasta scores: E(): 1.8e-18, 36.01% id in 236 aa.
   
    0.748
DIP1251
Conserved hypothetical protein; Similar to Mycobacterium tuberculosis hypothetical 30.9 kDa protein Rv2119 or MTCY261.15 SWALL:O33254 (EMBL:Z97559) (278 aa) fasta scores: E(): 9e-48, 48.16% id in 272 aa, and to Streptomyces coelicolor hypothetical 31.9 kDa protein SCI41.36 SWALL:Q9RJ55 (EMBL:AL132648) (284 aa) fasta scores: E(): 2.8e-45, 47.34% id in 264 aa.
       0.608
DIP1249
Conserved hypothetical protein; Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA.
       0.459
DIP1250
Putative M18-family aminopeptidase; Similar to Streptomyces coelicolor probable M18-family aminopeptidase 2 ApeB or SCGD3.02 SWALL:Q9XA76 (EMBL:AL096822) (432 aa) fasta scores: E(): 2.9e-75, 46.31% id in 421 aa, and to Mycobacterium leprae probable M18-family aminopeptidase 2 ApeB or PepC or PepX or ML2213 or MLCB5.29 SWALL:Q50022 (EMBL:U15182) (443 aa) fasta scores: E(): 4.7e-53, 38.78% id in 428 aa.
       0.457
Your Current Organism:
Corynebacterium diphtheriae
NCBI taxonomy Id: 257309
Other names: C. diphtheriae NCTC 13129, Corynebacterium diphtheriae NCTC 13129, Corynebacterium diphtheriae NCTC13129
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