STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DIP1274Putative membrane protein; Similar to Mycobacterium tuberculosis hypothetical 26.6 kDa protein Rv1491c or MT1538 or MTCY277.13c SWALL:YE91_MYCTU (SWALL:P71772) (252 aa) fasta scores: E(): 2.5e-24, 36.09% id in 205 aa, and to Streptomyces coelicolor putative integral membrane protein 2SCG61.05c SWALL:Q9K410 (EMBL:AL359949) (258 aa) fasta scores: E(): 2.3e-10, 28.09% id in 210 aa. (233 aa)    
Predicted Functional Partners:
DIP1275
Putative DNA-binding protein; No significant database matches.
       0.726
DIP1273
Similar to Mycobacterium tuberculosis probable methylmalonyl-CoA mutase small subunit MutA or Rv1492 or MT1539 or MTCY277.14 SWALL:MUTA_MYCTU (SWALL:P71773) (615 aa) fasta scores: E(): 1.5e-69, 43.15% id in 621 aa, and to Porphyromonas gingivalis methylmalonyl-CoA mutase small subunit MutA or McmA SWALL:MUTA_PORGI (SWALL:Q59676) (617 aa) fasta scores: E(): 4.9e-31, 30.73% id in 628 aa.
       0.605
sbm
Putative methylmalonyl-CoA mutase large subunit; Similar to Escherichia coli Sbm protein or B2917 SWALL:SBM_ECOLI (SWALL:P27253) (714 aa) fasta scores: E(): 1.6e-148, 60.2% id in 696 aa, and to Mycobacterium tuberculosis probable methylmalonyl-CoA mutase large subunit MutB or Rv1493 or MT1540 or MTCY277.15 SWALL:MUTB_MYCTU (SWALL:P71774) (750 aa) fasta scores: E(): 4.8e-198, 76.55% id in 708 aa.
       0.604
DIP1271
Putative kinase; Similar to Mycobacterium leprae putative kinase ML1798 SWALL:Q9CBM8 (EMBL:AL583923) (327 aa) fasta scores: E(): 9e-63, 57.86% id in 318 aa, and to Escherichia coli LAO/AO transport system kinase ArgK or B2918 SWALL:ARGK_ECOLI (SWALL:P27254) (331 aa) fasta scores: E(): 1.1e-47, 49.82% id in 289 aa.
       0.445
Your Current Organism:
Corynebacterium diphtheriae
NCBI taxonomy Id: 257309
Other names: C. diphtheriae NCTC 13129, Corynebacterium diphtheriae NCTC 13129, Corynebacterium diphtheriae NCTC13129
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