Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| DIP1282 | acnA | DIP1282 | DIP1283 | Hypothetical protein; Doubtful CDS. No strong consensus RBS usptream. No significant database matches. | Aconitate hydratase; Involved in the catabolism of short chain fatty acids (SCFA) via the tricarboxylic acid (TCA)(acetyl degradation route) and probably via the 2-methylcitrate cycle I (propionate degradation route). Catalyzes the reversible isomerization of citrate to isocitrate via cis-aconitate. Could catalyze the hydration of 2-methyl-cis-aconitate to yield (2R,3S)-2-methylisocitrate. The apo form of AcnA functions as a RNA-binding regulatory protein. | 0.631 |
| DIP1282 | acnR | DIP1282 | DIP1284 | Hypothetical protein; Doubtful CDS. No strong consensus RBS usptream. No significant database matches. | Putative TetR-famlily transcriptional regulator; AcnR negatively controls the expression of the aconitase gene acn. | 0.431 |
| acnA | DIP1282 | DIP1283 | DIP1282 | Aconitate hydratase; Involved in the catabolism of short chain fatty acids (SCFA) via the tricarboxylic acid (TCA)(acetyl degradation route) and probably via the 2-methylcitrate cycle I (propionate degradation route). Catalyzes the reversible isomerization of citrate to isocitrate via cis-aconitate. Could catalyze the hydration of 2-methyl-cis-aconitate to yield (2R,3S)-2-methylisocitrate. The apo form of AcnA functions as a RNA-binding regulatory protein. | Hypothetical protein; Doubtful CDS. No strong consensus RBS usptream. No significant database matches. | 0.631 |
| acnA | acnR | DIP1283 | DIP1284 | Aconitate hydratase; Involved in the catabolism of short chain fatty acids (SCFA) via the tricarboxylic acid (TCA)(acetyl degradation route) and probably via the 2-methylcitrate cycle I (propionate degradation route). Catalyzes the reversible isomerization of citrate to isocitrate via cis-aconitate. Could catalyze the hydration of 2-methyl-cis-aconitate to yield (2R,3S)-2-methylisocitrate. The apo form of AcnA functions as a RNA-binding regulatory protein. | Putative TetR-famlily transcriptional regulator; AcnR negatively controls the expression of the aconitase gene acn. | 0.695 |
| acnR | DIP1282 | DIP1284 | DIP1282 | Putative TetR-famlily transcriptional regulator; AcnR negatively controls the expression of the aconitase gene acn. | Hypothetical protein; Doubtful CDS. No strong consensus RBS usptream. No significant database matches. | 0.431 |
| acnR | acnA | DIP1284 | DIP1283 | Putative TetR-famlily transcriptional regulator; AcnR negatively controls the expression of the aconitase gene acn. | Aconitate hydratase; Involved in the catabolism of short chain fatty acids (SCFA) via the tricarboxylic acid (TCA)(acetyl degradation route) and probably via the 2-methylcitrate cycle I (propionate degradation route). Catalyzes the reversible isomerization of citrate to isocitrate via cis-aconitate. Could catalyze the hydration of 2-methyl-cis-aconitate to yield (2R,3S)-2-methylisocitrate. The apo form of AcnA functions as a RNA-binding regulatory protein. | 0.695 |