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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DIP1358Similar to Streptomyces coelicolor putative TetR family transcriptional regulator SCF6.16 SWALL:Q9RJL5 (EMBL:AL121849) (194 aa) fasta scores: E(): 6.8e-06, 25.53% id in 188 aa, and to Rhizobium loti probable transcription regulator MLL1924 SWALL:Q98JI8 (EMBL:AP002998) (205 aa) fasta scores: E(): 1.1e-05, 25.77% id in 194 aa. (196 aa)    
Predicted Functional Partners:
DIP1356
Putative membrane protein; Similar to Bacillus subtilis hypothetical 84.1 kDa protein in hemY-gltT intergenic region YhgE SWALL:YHGE_BACSU (SWALL:P32399) (775 aa) fasta scores: E(): 5.1e-22, 25.23% id in 761 aa, and to Lactococcus lactis hypothetical protein YjaE or LL0882 SWALL:Q9CH57 (EMBL:AE006322) (799 aa) fasta scores: E(): 6.5e-20, 24.68% id in 790 aa.
  
  
 0.927
DIP1357
Hypothetical protein; No significant database matches.
       0.680
sdaB
L-serine dehydratase; Similar to Pseudomonas aeruginosa L-serine dehydratase SdaB or PA5379 SWALL:Q9HTI5 (EMBL:AE004950) (458 aa) fasta scores: E(): 3.5e-84, 53.99% id in 463 aa, and to Escherichia coli L-serine dehydratase 1 SdaA or B1814 SWALL:SDHL_ECOLI (SWALL:P16095) (454 aa) fasta scores: E(): 3e-70, 49.24% id in 461 aa; Belongs to the iron-sulfur dependent L-serine dehydratase family.
       0.649
DIP1844
Putative TetR-family regulatory protein; Similar to Rhizobium loti transcriptional regulator MLL3939 TR:Q98F48 (EMBL:AP003003) (209 aa) fasta scores: E(): 4.6e-12, 33.65% id in 208 aa, and to Pseudomonas aeruginosa probable transcriptional regulator PA1403 TR:Q9I3U1 (EMBL:AE004569) (210 aa) fasta scores: E(): 2e-05, 27.57% id in 214 aa.
   
    0.483
DIP2250
Putative membrane protein; Region similar to many eg. Streptomyces coelicolor putative membrane protein SCBAC19G2.03c TR:CAC44513 (EMBL:AL596138) (397 aa) fasta scores: E(): 4.6e-19, 36.91% id in 409 aa, and to Staphylococcus aureus (strain N315), and SA2103 protein or SAV2310 TR:BAB58472 (EMBL:AP003136) (315 aa) fasta scores: E(): 4.5e-13, 31.07% id in 280 aa.
   
    0.483
DIP1193
Similar to Streptomyces coelicolor putative Na+/H+ antiporter SC4A10.04c SWALL:Q9S2Y0 (EMBL:AL109663) (528 aa) fasta scores: E(): 1.2e-47, 39.09% id in 532 aa, and to Rhizobium loti Na+/H+ antiporter MLL3064 SWALL:Q98H22 (EMBL:AP003001) (517 aa) fasta scores: E(): 9.6e-31, 28.62% id in 531 aa.
  
     0.467
DIP0937
Similar to Streptomyces coelicolor putative tetR-family transcriptional regulator SCF56.06 TR:Q9RD60 (EMBL:AL133424) (213 aa) fasta scores: E(): 4.4e-06, 35.59% id in 118 aa.
  
  
 0.450
Your Current Organism:
Corynebacterium diphtheriae
NCBI taxonomy Id: 257309
Other names: C. diphtheriae NCTC 13129, Corynebacterium diphtheriae NCTC 13129, Corynebacterium diphtheriae NCTC13129
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