STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DIP1454Putative membrane protein; Similar to Deinococcus radiodurans conserved hypothetical protein DR2468 TR:Q9RRM0 (EMBL:AE002076) (198 aa) fasta scores: E(): 7.8e-15, 36.18% id in 199 aa, and to Rhizobium meliloti hypothetical transmembrane protein SMC00963 TR:CAC45461 (EMBL:AL591785) (201 aa) fasta scores: E(): 2.5e-07, 29.38% id in 194 aa. (204 aa)    
Predicted Functional Partners:
DIP1453
Similar to Deinococcus radiodurans ABC transporter, ATP-binding protein DR2469 TR:Q9RRL9 (EMBL:AE002076) (226 aa) fasta scores: E(): 2.1e-33, 46.84% id in 222 aa, and to Rhizobium meliloti putative ATP-binding ABC transporter protein SMC00962 TR:CAC45462 (EMBL:AL591785) (226 aa) fasta scores: E(): 5e-27, 40.36% id in 218 aa.
 
 0.999
DIP1452
Putative membrane protein; Similar to Streptococcus pyogenes putative biotin synthase SPY0207 TR:Q9A1L4 (EMBL:AE006489) (179 aa) fasta scores: E(): 2e-15, 37.57% id in 173 aa, and to Rhizobium meliloti hypothetical transmembrane protein SMC00964 TR:CAC45460 (EMBL:AL591785) (187 aa) fasta scores: E(): 2.7e-14, 37.43% id in 179 aa.
 
 0.995
DIP0953
Putative ABC transport system ATP-binding protein; Similar to Staphylococcus aureus (strain N315) SA0928 protein or SAV1076 TR:BAB57238 (EMBL:AP003132) (466 aa) fasta scores: E(): 6.9e-32, 34.18% id in 433 aa.
  
 
 0.713
DIP0961
Similar to Bacillus subtilis homologous to many ATP-binding transport proteins YxlF TR:P94374 (EMBL:D83026) (295 aa) fasta scores: E(): 6.4e-12, 31.22% id in 221 aa, and to Escherichia coli, and putative aliphatic sulfonates transport ATP-binding protein SsuB or B0933 or Z1281 or ECS1016 SW:SSUB_ECOLI (P38053) (255 aa) fasta scores: E(): 3.3e-08, 31.25% id in 208 aa.
  
 
 0.713
DIP1451
Similar to Mycobacterium leprae hypothetical protein ML0986 TR:Q9CCC1 (EMBL:AL583920) (67 aa) fasta scores: E(): 7e-06, 39.68% id in 63 aa, and to Mycobacterium tuberculosis CDC1551 conserved hypothetical protein MT2808 TR:AAK47129 (EMBL:AE007109) (68 aa) fasta scores: E(): 4.1e-05, 34.92% id in 63 aa.
       0.620
recA
Recombinase A; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family.
       0.514
recX
Putative regulatory protein; Modulates RecA activity; Belongs to the RecX family.
       0.498
DIP0322
Similar to Escherichia coli hypothetical ABC transporter ATP-binding protein YddO or B1483 SW:YDDO_ECOLI (P77622) (308 aa) fasta scores: E(): 1.7e-15, 36.36% id in 209 aa.
  
   0.488
DIP0512
Similar to Bacillus subtilis oligopeptide transport ATP-binding protein OppF or Spo0KE SW:OPPF_BACSU (P24137) (308 aa) fasta scores: E(): 1.7e-36, 48.51% id in 235 aa.
  
   0.488
DIP0959
Similar in its full length to Mycobacterium tuberculosis putative peptide ABC transporter ATP-binding protein Rv3663c or MTV025.011c TR:O69631 (EMBL:AL022121) (548 aa) fasta scores: E(): 4.5e-100, 58.27% id in 544 aa, and N-terminal region and C-termianl region both similar to Bacillus subtilis oligopeptide transport ATP-binding protein OppD or Spo0KD SW:OPPD_BACSU (P24136) (358 aa) fasta scores: E(): 3.1e-38, 46.56% id in 262 aa.
  
   0.488
Your Current Organism:
Corynebacterium diphtheriae
NCBI taxonomy Id: 257309
Other names: C. diphtheriae NCTC 13129, Corynebacterium diphtheriae NCTC 13129, Corynebacterium diphtheriae NCTC13129
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