STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DIP1487Putative DNA repair related protein; Similar to Escherichia coli methylated-DNA--protein-cysteine methyltransferase Ogt or B1335 SW:OGT_ECOLI (P09168) (171 aa) fasta scores: E(): 8.7e-12, 32.7% id in 159 aa, and to Salmonella typhimurium methylated-DNA--protein-cysteine methyltransferase Ogt or STM1659 or STY1405 SW:OGT_SALTY (P37429) (171 aa) fasta scores: E(): 1e-10, 31.44% id in 159 aa. (169 aa)    
Predicted Functional Partners:
DIP1488
Similar to Mycobacterium tuberculosis cobyrinic acid A,C-diamide synthase CobB or Rv2848c or MT2914 or MTCY24A1.09 SW:COBB_MYCTU (O05811) (457 aa) fasta scores: E(): 1.1e-80, 54.54% id in 429 aa, and to Salmonella typhimurium cobyrinic acid A,C-diamide synthase CbiA SW:CBIA_SALTY (P29946) (459 aa) fasta scores: E(): 5.8e-30, 36.4% id in 445 aa.
       0.840
DIP1486
Putative cobalamin synthesis related protein; Similar to Staphylococcus aureus (strain N315) hypothetical protein SA0410 or SAV0450 TR:BAB56612 (EMBL:AP003130) (400 aa) fasta scores: E(): 4.2e-50, 48.16% id in 326 aa, and to Pseudomonas denitrificans CobW protein SW:COBW_PSEDE (P29937) (353 aa) fasta scores: E(): 1.1e-19, 29.22% id in 349 aa.
       0.737
DIP1489
Putative cobalamin adenosyltransferase; Similar to Mycobacterium tuberculosis CDC1551 Cob MT2915 TR:AAK47241 (EMBL:AE007116) (207 aa) fasta scores: E(): 5.1e-60, 68.9% id in 209 aa, and to Pseudomonas denitrificans CobO SW:COBO_PSEDE (P29930) (213 aa) fasta scores: E(): 5.8e-13, 41.75% id in 182 aa.
       0.650
pheT
Similar to Mycobacterium tuberculosis phenylalanyl-tRNA synthetase beta chain PheT or Rv1650 or MT1688 or MTCY06H11.15 SWALL:SYFB_MYCTU (SWALL:P94985) (831 aa) fasta scores: E(): 4.2e-156, 49.64% id in 844 aa, and to Bacillus subtilis phenylalanyl-tRNA synthetase beta chain PheT SWALL:SYFB_BACSU (SWALL:P17922) (804 aa) fasta scores: E(): 1.8e-53, 30.69% id in 847 aa.
     
 0.500
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
   
 
 0.458
Your Current Organism:
Corynebacterium diphtheriae
NCBI taxonomy Id: 257309
Other names: C. diphtheriae NCTC 13129, Corynebacterium diphtheriae NCTC 13129, Corynebacterium diphtheriae NCTC13129
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