STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DIP1503Putative membrane protein; Similar to Mycobacterium tuberculosis CDC1551 conserved hypothetical protein MT3867 TR:AAK48231 (EMBL:AE007181) (117 aa) fasta scores: E(): 1.1e-09, 47.25% id in 91 aa. (127 aa)    
Predicted Functional Partners:
rlmN
Conserved hypothetical protein; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs; Belongs to the radical SAM superfamily. RlmN family.
       0.677
DIP0899
Conserved hypothetical protein; Low similarity to parts of Mycobacterium tuberculosis CDC1551 conserved hypothetical protein MT0103 TR:AAK44326 (EMBL:AE006921) (287 aa) fasta scores: E(): 5.6e-09, 39.04% id in 105 aa.
  
     0.615
DIP2107
Similar to Streptomyces coelicolor putative integral membrane transport protein SCD10.28c TR:Q9K3U9 (EMBL:AL359988) (550 aa) fasta scores: E(): 6.2e-18, 25.27% id in 542 aa. Lies alongside a putative ABC transporter ATP-binding subunit.
 
    0.472
DIP1880
Putative exported protein; Poor database matches. Weakly similar to Streptomyces coelicolor hypothetical protein SC4G6.36 TR:Q9S2S3 (EMBL:AL096884) (266 aa) fasta scores: E(): 4.7e-06, 26.22% id in 225 aa, and to Mycobacterium leprae possible conserved membrane protein ML1667 TR:Q9CBS4 (EMBL:AL583923) (264 aa) fasta scores: E(): 1.5e-05, 28.77% id in 212 aa.
  
     0.466
DIP1336
Conserved hypothetical protein; C-terminal region similar to Mycobacterium tuberculosis hypothetical 31.7 kDa protein Rv2216 or MT2273 or MTCY190.27 SWALL:YM16_MYCTU (SWALL:Q10403) (301 aa) fasta scores: E(): 4e-32, 36.51% id in 293 aa, and N-terminal region to Bacillus halodurans BH1480 protein SWALL:Q9KCT9 (EMBL:AP001512) (144 aa) fasta scores: E(): 0.047, 27.35% id in 106 aa.
  
    0.458
DIP0774
Similar to Mycobacterium leprae hypothetical protein ML2155 TR:Q9CBE2 (EMBL:AL583924) (74 aa) fasta scores: E(): 7.5e-08, 54.09% id in 61 aa.
  
     0.416
Your Current Organism:
Corynebacterium diphtheriae
NCBI taxonomy Id: 257309
Other names: C. diphtheriae NCTC 13129, Corynebacterium diphtheriae NCTC 13129, Corynebacterium diphtheriae NCTC13129
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