STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DIP1549Hypothetical protein; No significant database matches. (142 aa)    
Predicted Functional Partners:
DIP1550
Hypothetical protein; No significant database matches.
       0.708
DIP1552
Putative glycogen phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.
       0.553
DIP1551
Putative peptidase; Similar to Streptomyces coelicolor peptidase SCD17.07c TR:Q9RKM4 (EMBL:AL118515) (423 aa) fasta scores: E(): 6.6e-71, 45.3% id in 415 aa, and to Thermoplasma volcanium carboxypeptidase TVG0758219 TR:BAB59893 (EMBL:AP000993) (404 aa) fasta scores: E(): 2.1e-34, 34.03% id in 379 aa.
       0.527
Your Current Organism:
Corynebacterium diphtheriae
NCBI taxonomy Id: 257309
Other names: C. diphtheriae NCTC 13129, Corynebacterium diphtheriae NCTC 13129, Corynebacterium diphtheriae NCTC13129
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