STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DIP1652Putative secreted protein; Similar to Streptomyces coelicolor putative secreted protein SC2G5.19 TR:Q9Z5A4 (EMBL:AL035478) (1156 aa) fasta scores: E(): 7.4e-51, 32.373% id in 1041 aa. (1254 aa)    
Predicted Functional Partners:
DIP1651
Similar to Neisseria meningitidis hypothetical protein NMB0234 TR:Q9K1C8 (EMBL:AE002381) (179 aa) fasta scores: E(): 0.00039, 28.313% id in 166 aa.
       0.773
DIP1653
Putative exported protein.
  
  
 0.769
DIP0359
Putative secreted hydrolase; Low similarity to Streptomyces scabies esterase precursor EstA SW:ESTA_STRSC (P22266) (345 aa) fasta scores: E(): 0.12, 26.28% id in 331 aa.
  
 
 0.733
DIP1654
Conserved hypothetical protein; Weak similarity to C-terminus of Corynebacterium glutamicum PS1 protein precursor Csp1 SW:CSP1_CORGL (Q01377) (657 aa) fasta scores: E(): 4.3e-06, 26.943% id in 193 aa.
       0.631
DIP0964
Putative protease; Similar to Streptomyces coelicolor putative hydrolase SCBAC14E8.01c TR:Q9ADJ8 (EMBL:AL590435) (228 aa) fasta scores: E(): 0.0013, 30.47% id in 233 aa.
 
   0.562
DIP1655
Putative exported protein; Weak similarity to C-terminus of Corynebacterium glutamicum PS1 protein precursor Csp1 SW:CSP1_CORGL (Q01377) (657 aa) fasta scores: E(): 1.7e-07, 40.196% id in 102 aa.
       0.520
DIP1826
Conserved hypothetical protein; Some similarity to Clostridium perfringens plasmid pCP13 hypothetical 28.2 kDa protein pcp29 TR:BAB62467 (EMBL:AP003515) (252 aa) fasta scores: E(): 1.4e-05, 27.513% id in 189 aa.
 
  
 0.407
tnp1250A-2
IS element transposase (pseudogene); HMMPfam hit to PF00872, Transposase, Mutator family.
       0.403
Your Current Organism:
Corynebacterium diphtheriae
NCBI taxonomy Id: 257309
Other names: C. diphtheriae NCTC 13129, Corynebacterium diphtheriae NCTC 13129, Corynebacterium diphtheriae NCTC13129
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