Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
DIP1660Conserved hypothetical protein; Similar to Agrobacterium tumefaciens AGR_C_1429p AGR_C_1429 TR:AAK86591 (EMBL:AE008011) (63 aa) fasta scores: E(): 0.0028, 45.283% id in 53 aa, and to Streptococcus pyogenes hypothetical protein SPY1261 TR:Q99ZE6 (EMBL:AE006565) (66 aa) fasta scores: E(): 0.0045, 37.931% id in 58 aa, and to Rhizobium meliloti hypothetical 10.1 kDa protein SMA2071 TR:AAK65789 (EMBL:AE007299) (96 aa) fasta scores: E(): 0.0053, 46.154% id in 52 aa, and to Staphylococcus aureus subspaureus N315. sigmaB-controlled gene product CsbD or SA1452 TR:Q99TM4 (EMBL:AP003134) (60 aa) [...] (69 aa)    
Predicted Functional Partners:
DIP0643
Putative DNA-binding protein; No significant database matches.
      
 0.697
DIP0837
Putative membrane protein; Low similarity to Mycobacterium tuberculosis hypothetical 46.1 kDa protein Rv0955 or MT0982 or MTCY10D7.19c SW:Y955_MYCTU (P71555) (455 aa) fasta scores: E(): 1.9e-17, 28.01% id in 439 aa.
  
     0.600
DIP0565
Hypothetical protein; No significant database matches. High concentration of alanine, glycine and proline residues.
  
    0.565
DIP1370
Conserved hypothetical protein; Similar to Corynebacterium glutamicum dipeptide-binding protein DciaE SWALL:O87329 (EMBL:AF038651) (502 aa) fasta scores: E(): 4e-83, 48.61% id in 434 aa, and to Mycobacterium tuberculosis hypothetical lipoprotein Rv2585c precursor or MT2662 or MTCY227.16 SWALL:YP85_MYCTU (SWALL:Q50636) (557 aa) fasta scores: E(): 7.1e-30, 29.09% id in 574 aa.
  
     0.562
DIP1912
Putative secreted protein; Poor database matches. Similar to Mycobacterium leprae probable exported protein ML2195 TR:Q50040 (EMBL:U15182) (283 aa) fasta scores: E(): 0.44, 23.39% id in 265 aa.
  
     0.561
DIP0383
Conserved hypothetical protein; Low similarity to Mycobacterium tuberculosis hypothetical 19.1 kDa protein Rv0481c or MT0499 or MTCY20G9.07c SW:Y481_MYCTU (Q11147) (174 aa) fasta scores: E(): 0.028, 23.92% id in 163 aa.
  
     0.553
DIP1410
Putative membrane protein; No significant database matches.
  
     0.552
DIP1661
Similar to Neisseria meningitidis putative integral membrane protein NMA0370 TR:Q9JWH5 (EMBL:AL162753) (462 aa) fasta scores: E(): 8.6e-89, 59.488% id in 469 aa, and to Pasteurella multocida hypothetical protein PM0989 TR:Q9CM54 (EMBL:AE006138) (452 aa) fasta scores: E(): 3.3e-82, 52.402% id in 458 aa.
       0.512
DIP1995
Putative membrane protein; Weakly similar to the N-terminal regions of Mycobacterium leprae putative membrane protein ML0228 TR:O69526 (EMBL:AL023093) (432 aa) fasta scores: E(): 0.025, 25.15% id in 318 aa, and to Mycobacterium tuberculosis CDC1551 conserved hypothetical protein MT3709 TR:AAK48067 (EMBL:AE007170) (397 aa) fasta scores: E(): 0.071, 23.51% id in 336 aa.
  
     0.509
DIP2067
Conserved hypothetical protein; Similar to Mycobacterium leprae hypothetical 25.3 kDa protein ML0281 or MLCB4.24 SWALL:O69596 (EMBL:AL023514) (229 aa) fasta scores: E(): 6.1e-08, 36.63% id in 202 aa.
 
    0.476
Your Current Organism:
Corynebacterium diphtheriae
NCBI taxonomy Id: 257309
Other names: C. diphtheriae NCTC 13129, Corynebacterium diphtheriae NCTC 13129, Corynebacterium diphtheriae NCTC13129
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