Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
DIP1664Conserved hypothetical protein; Similar to Streptomyces coelicolor putative Mut-like protein 2SCG2.26c TR:Q9EX27 (EMBL:AL445963) (159 aa) fasta scores: E(): 1.3e-15, 46.7% id in 167 aa. (178 aa)    
Predicted Functional Partners:
DIP1665
Hypothetical protein; Doubtful CDS. No strong consensus RBS usptream. No significant database matches.
       0.724
thrC
Threonine synthase; Similar to Corynebacterium glutamicum threonine synthase ThrC SW:THRC_CORGL (P23669) (481 aa) fasta scores: E(): 7.1e-155, 79.07% id in 478 aa.
       0.629
DIP0951
Putative membrane protein; Similar to Bacillus subtilis YkoE TR:O34738 (EMBL:AJ002571) (199 aa) fasta scores: E(): 5.8e-16, 39.36% id in 188 aa.
  
     0.532
Your Current Organism:
Corynebacterium diphtheriae
NCBI taxonomy Id: 257309
Other names: C. diphtheriae NCTC 13129, Corynebacterium diphtheriae NCTC 13129, Corynebacterium diphtheriae NCTC13129
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