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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ectPSimilar to Corynebacterium glutamicum EctP protein (Transport of ectoine, glycine betaine, proline) TR:O86143 (EMBL:AJ001436) (615 aa) fasta scores: E(): 5.2e-181, 73.23% id in 609 aa, and to Bacillus subtilis glycine betaine transporter OpuD SW:OPUD_BACSU (P54417) (512 aa) fasta scores: E(): 2.4e-65, 38.35% id in 511 aa; Belongs to the BCCT transporter (TC 2.A.15) family. (608 aa)    
Predicted Functional Partners:
gbsA
Similar to Bacillus subtilis betaine aldehyde dehydrogenase GbsA SW:DHAB_BACSU (P71016) (490 aa) fasta scores: E(): 2e-73, 54.63% id in 496 aa, and to Streptomyces coelicolor betaine aldehyde dehydrogenase GbsA TR:Q9K3J2 (EMBL:AL389898) (509 aa) fasta scores: E(): 3.2e-88, 55.75% id in 504 aa.
  
  
 0.626
DIP1740
Putative ABC transport system solute-binding secreted protein; Similar to Rhizobium loti dipeptide-binding protein of ABC transporter MLR1186 TR:Q98L42 (EMBL:AP002996) (497 aa) fasta scores: E(): 8e-52, 34.96% id in 449 aa.
       0.536
DIP1741
Similar to Rhizobium loti permease protein of oligopeptide ABC transporter MLR1187 TR:Q98L41 (EMBL:AP002996) (315 aa) fasta scores: E(): 1.3e-43, 42.2% id in 308 aa, and to Bacillus subtilis oligopeptide transport system permease protein AppB SW:APPB_BACSU (P42062) (317 aa) fasta scores: E(): 2e-35, 35.93% id in 320 aa.
       0.521
DIP1742
Similar to Rhizobium loti permease protein of oligopeptide ABC transporter MLR1189 TR:Q98L40 (EMBL:AP002996) (289 aa) fasta scores: E(): 1.8e-49, 52.1% id in 261 aa, and to Escherichia coli dipeptide transport system permease protein DppC or B3542 or Z4959 or ECS4422 SW:DPPC_ECOLI (P37315) (300 aa) fasta scores: E(): 5e-36, 42.96% id in 270 aa.
       0.521
DIP1743
Similar to Streptomyces coelicolor putative oligopeptide ABC transporter ATP-binding protein SCBAC1A6.35c TR:Q9ADF2 (EMBL:AL589708) (585 aa) fasta scores: E(): 1.2e-33, 44.29% id in 526 aa.
       0.521
Your Current Organism:
Corynebacterium diphtheriae
NCBI taxonomy Id: 257309
Other names: C. diphtheriae NCTC 13129, Corynebacterium diphtheriae NCTC 13129, Corynebacterium diphtheriae NCTC13129
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