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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DIP1823HNH endonuclease family protein; Similar to bacteriophage phi-C31 hypothetical protein orf 7 TR:Q38028 (EMBL:X76288) (121 aa) fasta scores: E(): 0.0011, 40.385% id in 52 aa, and to Deinococcus radiodurans conserved hypothetical protein DR2409 TR:Q9RRS6 (EMBL:AE002071) (186 aa) fasta scores: E(): 0.0026, 39.683% id in 63 aa, and to Mycobacterium tuberculosis CDC1551 HNH endonuclease family protein MT2545 TR:AAK46845 (EMBL:AE007091) (222 aa) fasta scores: E(): 0.049, 36.986% id in 73 aa. (92 aa)    
Predicted Functional Partners:
DIP1822
Hypothetical protein; No significant database matches.
       0.773
DIP1824
Similar to Mycobacteriophage TM4 putative terminase gp4 TR:Q9ZX73 (EMBL:AF068845) (474 aa) fasta scores: E(): 2.6e-13, 24.364% id in 472 aa, and to Bacteriophage HK97 terminase large subunit 2 TR:Q9MCT1 (EMBL:AF069529) (504 aa) fasta scores: E(): 0.019, 23.741% id in 278 aa.
  
  
 0.595
Your Current Organism:
Corynebacterium diphtheriae
NCBI taxonomy Id: 257309
Other names: C. diphtheriae NCTC 13129, Corynebacterium diphtheriae NCTC 13129, Corynebacterium diphtheriae NCTC13129
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