STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DIP1824Similar to Mycobacteriophage TM4 putative terminase gp4 TR:Q9ZX73 (EMBL:AF068845) (474 aa) fasta scores: E(): 2.6e-13, 24.364% id in 472 aa, and to Bacteriophage HK97 terminase large subunit 2 TR:Q9MCT1 (EMBL:AF069529) (504 aa) fasta scores: E(): 0.019, 23.741% id in 278 aa. (485 aa)    
Predicted Functional Partners:
DIP1834
Putative phage protein; Similar to Bacteriophage r1t ORF40 TR:Q38126 (EMBL:U38906) (213 aa) fasta scores: E(): 0.019, 25.904% id in 166 aa, and to Escherichia coli O157:H7 putative tail length tape measure protein precursor ECS2949 TR:BAB36372 (EMBL:AP002560) (881 aa) fasta scores: E(): 0.025, 27.698% id in 278 aa.
 
     0.712
DIP0203
Putative phage terminase (pseudogene); ProfileScan hit to PS50312, Aspartic acid-rich region.
 
   
 0.602
DIP1823
HNH endonuclease family protein; Similar to bacteriophage phi-C31 hypothetical protein orf 7 TR:Q38028 (EMBL:X76288) (121 aa) fasta scores: E(): 0.0011, 40.385% id in 52 aa, and to Deinococcus radiodurans conserved hypothetical protein DR2409 TR:Q9RRS6 (EMBL:AE002071) (186 aa) fasta scores: E(): 0.0026, 39.683% id in 63 aa, and to Mycobacterium tuberculosis CDC1551 HNH endonuclease family protein MT2545 TR:AAK46845 (EMBL:AE007091) (222 aa) fasta scores: E(): 0.049, 36.986% id in 73 aa.
  
  
 0.595
DIP1825
Hypothetical protein; No significant database matches.
     
 0.549
DIP0204
C-terminal region similar to Bacteriophage BFK20 putative prohead protease TR:Q9MBK0 (EMBL:AJ278322) (204 aa) fasta scores: E(): 1.1e-35, 66.46% id in 164 aa, and N-terminal region to Bacteriophage BFK20 hypothetical 18.4 kDa protein TR:Q9MBK1 (EMBL:AJ278322) (176 aa) fasta scores: E(): 6.2e-14, 51.06% id in 94 aa. Note: It seems these two bacterophage proteins have been fused into DIP0204.
 
     0.494
DIP1826
Conserved hypothetical protein; Some similarity to Clostridium perfringens plasmid pCP13 hypothetical 28.2 kDa protein pcp29 TR:BAB62467 (EMBL:AP003515) (252 aa) fasta scores: E(): 1.4e-05, 27.513% id in 189 aa.
       0.444
DIP0736
Putative protease; C-terminal region similar to Drosophila erecta trypsin zeta precursor Try-ZetA SW:TRYZ_DROER (P54630) (281 aa) fasta scores: E(): 0.17, 26.03% id in 242 aa.
  
     0.432
DIP0205
Similar to Bacteriophage BFK20 putative major capsid protein TR:Q9MBJ9 (EMBL:AJ278322) (428 aa) fasta scores: E(): 5e-66, 47.14% id in 420 aa.
 
     0.420
Your Current Organism:
Corynebacterium diphtheriae
NCBI taxonomy Id: 257309
Other names: C. diphtheriae NCTC 13129, Corynebacterium diphtheriae NCTC 13129, Corynebacterium diphtheriae NCTC13129
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.