STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DIP1836Contains collagen-like Pro/Gly repeat; Similar to Gallus gallus collagen alpha 1 Col3A1 SW:CA13_CHICK (P12105) (1262 aa) fasta scores: E(): 3.8e-13, 48.023% id in 177 aa. (262 aa)    
Predicted Functional Partners:
DIP1834
Putative phage protein; Similar to Bacteriophage r1t ORF40 TR:Q38126 (EMBL:U38906) (213 aa) fasta scores: E(): 0.019, 25.904% id in 166 aa, and to Escherichia coli O157:H7 putative tail length tape measure protein precursor ECS2949 TR:BAB36372 (EMBL:AP002560) (881 aa) fasta scores: E(): 0.025, 27.698% id in 278 aa.
       0.773
DIP1835
Hypothetical protein; No significant database matches.
       0.773
DIP1830
Hypothetical protein; No significant database matches.
       0.558
DIP1831
Conserved hypothetical protein; Similar to Bifidobacterium longum NCC2705 hypothetical protein BL0379 SWALL:AAN24215 (EMBL:AE014655) (140 aa) fasta scores: E(): 1.7e-05, 34.14% id in 123 aa.
       0.558
DIP1832
Putative phage protein; Similar to Bacteriophage phi-C31 gp40 40 TR:Q9ZXA7 (EMBL:AJ006589) (143 aa) fasta scores: E(): 1.3e-05, 25.362% id in 138 aa.
       0.558
DIP1833
Putative phage protein; Similar to Bacteriophage Mu hypothetical protein gp14 14 or e15 SW:VG14_BPMU (Q38492) (100 aa) fasta scores: E(): 0.86, 32.955% id in 88 aa.
       0.558
DIP1828
Similar to Mycobacterium tuberculosis hypothetical 18.5 kDa protein Rv1577c or MTCY336.27 TR:O06613 (EMBL:Z95586) (170 aa) fasta scores: E(): 4.4e-06, 34.507% id in 142 aa, and to Mycobacterium tuberculosis hypothetical 19.3 kDa protein Rv2651c or MTCY441.20c TR:P71948 (EMBL:Z80225) (177 aa) fasta scores: E(): 4.5e-06, 35.664% id in 143 aa.
       0.461
DIP1829
Hypothetical protein; No significant database matches.
       0.461
Your Current Organism:
Corynebacterium diphtheriae
NCBI taxonomy Id: 257309
Other names: C. diphtheriae NCTC 13129, Corynebacterium diphtheriae NCTC 13129, Corynebacterium diphtheriae NCTC13129
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.